#SentieonCommandLine: /lustre8/home/ykawai-tnproj-pg/packages/sentieon-genomics-201911/libexec/driver -t 8 -r /lustre8/home/ncbn-pg/data/resource/Homo_sapiens_assembly38.fasta --interval /lustre8/home/ncbn-pg/data/resource/picard-interval-list/GRCh38.chrX.interval_list -i SGDP/LP6005441-DNA_B06.hs38DH/LP6005441-DNA_B06.hs38DH.cram --algo WgsMetricsAlgo --min_map_qual 0 SGDP/LP6005441-DNA_B06.hs38DH/QCmetrics/LP6005441-DNA_B06.hs38DH.WgsMetrics.chrX.txt GENOME_TERRITORY MEAN_COVERAGE SD_COVERAGE MEDIAN_COVERAGE MAD_COVERAGE PCT_EXC_MAPQ PCT_EXC_DUPE PCT_EXC_UNPAIRED PCT_EXC_BASEQ PCT_EXC_OVERLAP PCT_EXC_CAPPED PCT_EXC_TOTAL PCT_1X PCT_5X PCT_10X PCT_15X PCT_20X PCT_25X PCT_30X PCT_40X PCT_50X PCT_60X PCT_70X PCT_80X PCT_90X PCT_100X HET_SNP_SENSITIVITY HET_SNP_Q 152114341 63.836 12.697 64 7 0 0.026429 0.0024519 0.050864 0.0072466 0.00037978 0.087371 0.9997 0.99916 0.99824 0.99693 0.99511 0.99253 0.98876 0.97241 0.90681 0.67229 0.3004 0.07037 0.012149 0.004454 0.9994 32 coverage high_quality_coverage_count 0 45517 1 19869 2 19502 3 20809 4 22511 5 24307 6 26470 7 27592 8 30042 9 31325 10 34435 11 36766 12 39285 13 42263 14 45702 15 48986 16 51575 17 54878 18 58622 19 62794 20 67502 21 73222 22 77710 23 84238 24 89949 25 97692 26 105136 27 113344 28 123867 29 134593 30 147207 31 162580 32 177668 33 197140 34 219221 35 243885 36 275013 37 310668 38 352196 39 401346 40 462234 41 532254 42 616943 43 718360 44 836183 45 979453 46 1143862 47 1334944 48 1553702 49 1800055 50 2070943 51 2371615 52 2689862 53 3027200 54 3380329 55 3736774 56 4099175 57 4448142 58 4773567 59 5076086 60 5341617 61 5563167 62 5729040 63 5844751 64 5893373 65 5894273 66 5818135 67 5692409 68 5511645 69 5281775 70 5008137 71 4705959 72 4378020 73 4030697 74 3673275 75 3312358 76 2961430 77 2623065 78 2300385 79 1997504 80 1720539 81 1471150 82 1244445 83 1045065 84 871875 85 720452 86 591282 87 484225 88 391468 89 315657 90 254055 91 205373 92 164749 93 132785 94 106486 95 86207 96 70993 97 59218 98 49288 99 41388 100 36048 101 31327 102 27929 103 25078 104 22572 105 20452 106 19272 107 18050 108 16563 109 15452 110 14696 111 13798 112 13177 113 12685 114 11974 115 11584 116 11168 117 10693 118 10106 119 9768 120 9365 121 9091 122 8465 123 8130 124 7982 125 7681 126 7506 127 7242 128 7073 129 6690 130 6428 131 6100 132 6219 133 6029 134 5820 135 5636 136 5550 137 5540 138 5246 139 5100 140 4915 141 4806 142 4570 143 4435 144 4298 145 4321 146 4064 147 3862 148 3800 149 3556 150 3467 151 3246 152 3255 153 3126 154 3058 155 2989 156 2967 157 2804 158 2813 159 2570 160 2512 161 2433 162 2468 163 2335 164 2196 165 2126 166 1996 167 1899 168 1882 169 1823 170 1862 171 1748 172 1648 173 1596 174 1502 175 1431 176 1532 177 1423 178 1402 179 1389 180 1319 181 1250 182 1313 183 1278 184 1214 185 1143 186 1183 187 1081 188 1077 189 1054 190 945 191 956 192 939 193 860 194 851 195 862 196 846 197 784 198 802 199 781 200 771 201 726 202 768 203 755 204 748 205 673 206 636 207 633 208 707 209 644 210 623 211 627 212 616 213 588 214 612 215 579 216 567 217 550 218 574 219 527 220 476 221 493 222 461 223 475 224 461 225 474 226 451 227 451 228 471 229 450 230 443 231 426 232 413 233 391 234 388 235 354 236 362 237 388 238 338 239 344 240 377 241 369 242 350 243 328 244 333 245 343 246 325 247 334 248 326 249 361 250 32688