#SentieonCommandLine: /lustre8/home/ykawai-tnproj-pg/packages/sentieon-genomics-201911/libexec/driver -t 8 -r /lustre8/home/ncbn-pg/data/resource/Homo_sapiens_assembly38.fasta --interval /lustre8/home/ncbn-pg/data/resource/picard-interval-list/GRCh38.chrY.interval_list -i SGDP/LP6005441-DNA_B06.hs38DH/LP6005441-DNA_B06.hs38DH.cram --algo WgsMetricsAlgo --min_map_qual 0 SGDP/LP6005441-DNA_B06.hs38DH/QCmetrics/LP6005441-DNA_B06.hs38DH.WgsMetrics.chrY.txt
GENOME_TERRITORY	MEAN_COVERAGE	SD_COVERAGE	MEDIAN_COVERAGE	MAD_COVERAGE	PCT_EXC_MAPQ	PCT_EXC_DUPE	PCT_EXC_UNPAIRED	PCT_EXC_BASEQ	PCT_EXC_OVERLAP	PCT_EXC_CAPPED	PCT_EXC_TOTAL	PCT_1X	PCT_5X	PCT_10X	PCT_15X	PCT_20X	PCT_25X	PCT_30X	PCT_40X	PCT_50X	PCT_60X	PCT_70X	PCT_80X	PCT_90X	PCT_100X	HET_SNP_SENSITIVITY	HET_SNP_Q	
23636355	3.7562	22.838	0	0	0	0.086201	0.0050925	0.051297	0.024133	0.4535	0.62023	0.1609	0.088797	0.058189	0.042202	0.03292	0.027098	0.02329	0.018727	0.015997	0.014169	0.012794	0.011751	0.010891	0.010216	0.12368	1	

coverage	high_quality_coverage_count	
0	19833152
1	764862
2	411508
3	295555
4	232446
5	190791
6	163392
7	140727
8	122370
9	106183
10	94411
11	82647
12	74727
13	66187
14	59897
15	53124
16	48105
17	43494
18	39209
19	35464
20	32087
21	29740
22	27500
23	25228
24	23058
25	21006
26	19238
27	17751
28	16528
29	15473
30	14135
31	13179
32	12241
33	11754
34	10920
35	10071
36	9539
37	9093
38	8540
39	8394
40	7999
41	7395
42	7262
43	6869
44	6505
45	6304
46	5980
47	5713
48	5484
49	4996
50	5111
51	4793
52	4616
53	4523
54	4480
55	4128
56	4063
57	4038
58	3805
59	3653
60	3507
61	3437
62	3497
63	3539
64	3237
65	3257
66	3171
67	3013
68	2982
69	2873
70	2799
71	2753
72	2627
73	2428
74	2388
75	2322
76	2380
77	2422
78	2331
79	2196
80	2256
81	2180
82	2107
83	2076
84	2020
85	2057
86	2088
87	1934
88	1858
89	1746
90	1714
91	1688
92	1679
93	1539
94	1648
95	1633
96	1558
97	1535
98	1535
99	1424
100	1425
101	1329
102	1364
103	1382
104	1226
105	1259
106	1217
107	1175
108	1151
109	1141
110	1122
111	1159
112	1136
113	1128
114	1092
115	1097
116	1096
117	1020
118	1054
119	1030
120	1015
121	993
122	963
123	977
124	929
125	928
126	963
127	963
128	957
129	930
130	903
131	914
132	924
133	908
134	873
135	821
136	880
137	852
138	732
139	826
140	833
141	812
142	760
143	839
144	796
145	799
146	809
147	763
148	778
149	810
150	800
151	764
152	714
153	786
154	692
155	693
156	688
157	744
158	709
159	701
160	669
161	711
162	651
163	703
164	652
165	695
166	686
167	671
168	687
169	707
170	655
171	637
172	584
173	618
174	657
175	592
176	637
177	651
178	637
179	620
180	614
181	630
182	662
183	653
184	629
185	628
186	609
187	605
188	601
189	607
190	553
191	558
192	537
193	555
194	569
195	550
196	525
197	523
198	488
199	508
200	498
201	475
202	503
203	475
204	500
205	495
206	489
207	446
208	433
209	465
210	467
211	443
212	448
213	444
214	410
215	410
216	414
217	442
218	423
219	373
220	381
221	416
222	423
223	389
224	420
225	406
226	407
227	416
228	405
229	405
230	397
231	384
232	369
233	400
234	401
235	362
236	388
237	389
238	377
239	394
240	396
241	387
242	386
243	404
244	382
245	407
246	377
247	365
248	384
249	425
250	138715