#SentieonCommandLine: /lustre8/home/ykawai-tnproj-pg/packages/sentieon-genomics-201911/libexec/driver -t 8 -r /lustre8/home/ncbn-pg/data/resource/Homo_sapiens_assembly38.fasta --interval /lustre8/home/ncbn-pg/data/resource/picard-interval-list/GRCh38.autosome-PAR.interval_list -i SGDP/LP6005441-DNA_B08.hs38DH/LP6005441-DNA_B08.hs38DH.cram --algo WgsMetricsAlgo --min_map_qual 0 SGDP/LP6005441-DNA_B08.hs38DH/QCmetrics/LP6005441-DNA_B08.hs38DH.WgsMetrics.autosome.txt GENOME_TERRITORY MEAN_COVERAGE SD_COVERAGE MEDIAN_COVERAGE MAD_COVERAGE PCT_EXC_MAPQ PCT_EXC_DUPE PCT_EXC_UNPAIRED PCT_EXC_BASEQ PCT_EXC_OVERLAP PCT_EXC_CAPPED PCT_EXC_TOTAL PCT_1X PCT_5X PCT_10X PCT_15X PCT_20X PCT_25X PCT_30X PCT_40X PCT_50X PCT_60X PCT_70X PCT_80X PCT_90X PCT_100X HET_SNP_SENSITIVITY HET_SNP_Q 2747965384 34.201 11.678 34 5 0 0.02811 0.0028186 0.068896 0.0047009 0.015042 0.11957 0.99874 0.99638 0.99316 0.98638 0.96423 0.89023 0.71574 0.22296 0.028563 0.0088074 0.0061944 0.0047603 0.0038033 0.0031333 0.99742 26 coverage high_quality_coverage_count 0 3468713 1 1859083 2 1599354 3 1518896 4 1504141 5 1529019 6 1597061 7 1715099 8 1880413 9 2121554 10 2448904 11 2902811 12 3513675 13 4343409 14 5433973 15 6878580 16 8816891 17 11379731 18 14735278 19 19053054 20 24511274 21 31241613 22 39336703 23 48780641 24 59469209 25 71171164 26 83589734 27 96231014 28 108517733 29 119979988 30 129966229 31 138053988 32 143782076 33 146752633 34 146937945 35 144319892 36 139084437 37 131568674 38 122200662 39 111483938 40 99892797 41 87982565 42 76152191 43 64811983 44 54293856 45 44746284 46 36351850 47 29082760 48 22965970 49 17914683 50 13817774 51 10562991 52 8016352 53 6061027 54 4589338 55 3484067 56 2672673 57 2081939 58 1656171 59 1346472 60 1124312 61 962662 62 843754 63 754899 64 686353 65 634797 66 591172 67 555460 68 526847 69 500075 70 475892 71 453516 72 434641 73 414561 74 398885 75 381907 76 365908 77 352123 78 339305 79 324196 80 311326 81 300872 82 287933 83 277029 84 266051 85 254830 86 246787 87 237268 88 227701 89 219985 90 212106 91 204964 92 198912 93 192456 94 185985 95 180476 96 173799 97 169140 98 163885 99 159548 100 155354 101 150975 102 146469 103 142605 104 138621 105 136006 106 131590 107 128493 108 126271 109 122547 110 119588 111 117833 112 114658 113 112198 114 109569 115 107116 116 104413 117 101868 118 99732 119 96436 120 94566 121 92167 122 89930 123 87584 124 85111 125 82886 126 80536 127 78465 128 76739 129 74772 130 72747 131 71139 132 69239 133 67245 134 65378 135 64681 136 62252 137 60596 138 58702 139 57694 140 56245 141 54447 142 53544 143 52087 144 50616 145 49602 146 48536 147 47320 148 45898 149 45050 150 44106 151 43204 152 41989 153 41249 154 40228 155 39127 156 38043 157 37830 158 37316 159 36344 160 35334 161 34894 162 34061 163 33580 164 32877 165 32242 166 31985 167 31170 168 30862 169 30379 170 29975 171 29859 172 28834 173 28374 174 28489 175 27817 176 27796 177 26787 178 26721 179 26102 180 25561 181 25355 182 25061 183 24660 184 24159 185 23623 186 23614 187 23100 188 22519 189 22305 190 21936 191 21855 192 21203 193 21402 194 20961 195 20958 196 20635 197 19927 198 19915 199 19571 200 19286 201 19101 202 18770 203 18182 204 18140 205 17763 206 17280 207 17354 208 17071 209 17046 210 16751 211 16412 212 16132 213 15978 214 15683 215 15575 216 15246 217 15223 218 15055 219 14711 220 14718 221 14514 222 14255 223 14073 224 13882 225 13636 226 13714 227 13398 228 13308 229 13030 230 13254 231 12848 232 12546 233 12405 234 12428 235 12264 236 12119 237 11896 238 11856 239 11647 240 11569 241 11459 242 11501 243 11229 244 11240 245 11114 246 10975 247 10941 248 10714 249 10509 250 1986326