#SentieonCommandLine: /lustre8/home/ykawai-tnproj-pg/packages/sentieon-genomics-201911/libexec/driver -t 8 -r /lustre8/home/ncbn-pg/data/resource/Homo_sapiens_assembly38.fasta --interval /lustre8/home/ncbn-pg/data/resource/picard-interval-list/GRCh38.autosome-PAR.interval_list -i SGDP/LP6005441-DNA_C01.hs38DH/LP6005441-DNA_C01.hs38DH.cram --algo WgsMetricsAlgo --min_map_qual 0 SGDP/LP6005441-DNA_C01.hs38DH/QCmetrics/LP6005441-DNA_C01.hs38DH.WgsMetrics.autosome.txt GENOME_TERRITORY MEAN_COVERAGE SD_COVERAGE MEDIAN_COVERAGE MAD_COVERAGE PCT_EXC_MAPQ PCT_EXC_DUPE PCT_EXC_UNPAIRED PCT_EXC_BASEQ PCT_EXC_OVERLAP PCT_EXC_CAPPED PCT_EXC_TOTAL PCT_1X PCT_5X PCT_10X PCT_15X PCT_20X PCT_25X PCT_30X PCT_40X PCT_50X PCT_60X PCT_70X PCT_80X PCT_90X PCT_100X HET_SNP_SENSITIVITY HET_SNP_Q 2747965384 39.144 12.004 39 5 0 0.01954 0.0014553 0.070329 0.0059935 0.013444 0.11076 0.99878 0.99688 0.99459 0.99109 0.98292 0.95797 0.88103 0.45943 0.090174 0.014182 0.0075947 0.005699 0.0044571 0.0036026 0.99774 26 coverage high_quality_coverage_count 0 3339450 1 1514268 2 1290138 3 1218864 4 1198996 5 1188463 6 1199649 7 1236025 8 1292054 9 1376993 10 1494367 11 1649685 12 1861905 13 2136561 14 2497488 15 2944932 16 3520609 17 4270253 18 5224639 19 6467771 20 8082085 21 10192162 22 12937934 23 16454202 24 20917957 25 26429398 26 33144278 27 41096969 28 50246241 29 60513680 30 71656350 31 83356580 32 95206459 33 106689471 34 117345685 35 126621363 36 134072192 37 139310872 38 142044595 39 142223917 40 139771771 41 134926072 42 128006194 43 119335200 44 109367431 45 98561805 46 87408947 47 76279330 48 65557376 49 55490808 50 46286931 51 38102667 52 30927963 53 24788695 54 19648937 55 15404775 56 11959648 57 9221661 58 7072657 59 5408599 60 4134788 61 3178400 62 2467955 63 1945582 64 1559923 65 1277293 66 1071894 67 922021 68 813072 69 731586 70 666998 71 618327 72 578368 73 547941 74 519521 75 495930 76 473379 77 455073 78 435586 79 418182 80 403200 81 387966 82 373035 83 359505 84 346087 85 333518 86 320194 87 307848 88 296044 89 285357 90 274481 91 264590 92 255354 93 246802 94 237494 95 228459 96 221004 97 212722 98 207145 99 199863 100 193175 101 186911 102 180811 103 174898 104 169403 105 163769 106 158480 107 154824 108 150260 109 145633 110 142086 111 138471 112 134395 113 131908 114 127451 115 124176 116 120717 117 118028 118 115407 119 112159 120 108813 121 106538 122 104034 123 100933 124 98913 125 96149 126 92969 127 91203 128 88820 129 86815 130 84446 131 82521 132 79573 133 77717 134 75566 135 73885 136 71982 137 70087 138 68268 139 66999 140 65426 141 63886 142 62509 143 60868 144 59554 145 58273 146 57068 147 55993 148 54762 149 54060 150 52902 151 51756 152 50818 153 49879 154 48823 155 48106 156 47265 157 46878 158 46031 159 45210 160 44417 161 43500 162 42458 163 41895 164 40956 165 40295 166 39748 167 38921 168 38535 169 37575 170 37077 171 36237 172 35577 173 35199 174 34572 175 33821 176 33469 177 32790 178 32108 179 31451 180 31036 181 30573 182 30061 183 29117 184 28565 185 29113 186 28273 187 27831 188 27453 189 27201 190 26835 191 26471 192 26085 193 25852 194 25175 195 25175 196 24608 197 23938 198 24249 199 23704 200 23463 201 23212 202 22920 203 22492 204 22036 205 21900 206 21381 207 21133 208 21268 209 20788 210 20640 211 20204 212 20218 213 19925 214 19630 215 19372 216 18899 217 19023 218 18826 219 18414 220 18236 221 17876 222 17740 223 17517 224 17125 225 16923 226 16904 227 16557 228 16300 229 16306 230 15993 231 15688 232 15579 233 15468 234 14927 235 14678 236 14797 237 14378 238 14585 239 14005 240 13993 241 13947 242 13776 243 13296 244 13265 245 13016 246 12728 247 12618 248 12336 249 12082 250 1990371