#SentieonCommandLine: /lustre8/home/ykawai-tnproj-pg/packages/sentieon-genomics-201911/libexec/driver -t 8 -r /lustre8/home/ncbn-pg/data/resource/Homo_sapiens_assembly38.fasta --interval /lustre8/home/ncbn-pg/data/resource/picard-interval-list/GRCh38.chrX.interval_list -i SGDP/LP6005441-DNA_C01.hs38DH/LP6005441-DNA_C01.hs38DH.cram --algo WgsMetricsAlgo --min_map_qual 0 SGDP/LP6005441-DNA_C01.hs38DH/QCmetrics/LP6005441-DNA_C01.hs38DH.WgsMetrics.chrX.txt GENOME_TERRITORY MEAN_COVERAGE SD_COVERAGE MEDIAN_COVERAGE MAD_COVERAGE PCT_EXC_MAPQ PCT_EXC_DUPE PCT_EXC_UNPAIRED PCT_EXC_BASEQ PCT_EXC_OVERLAP PCT_EXC_CAPPED PCT_EXC_TOTAL PCT_1X PCT_5X PCT_10X PCT_15X PCT_20X PCT_25X PCT_30X PCT_40X PCT_50X PCT_60X PCT_70X PCT_80X PCT_90X PCT_100X HET_SNP_SENSITIVITY HET_SNP_Q 152114341 19.475 5.7797 19 3 0 0.013568 0.0016347 0.065931 0.0059718 0.00020145 0.087307 0.99897 0.995 0.97416 0.83708 0.48241 0.15652 0.031549 0.0030157 0.0012064 0.00065914 0.00043578 0.00031831 0.00023999 0.00018631 0.99518 23 coverage high_quality_coverage_count 0 156375 1 109694 2 130911 3 160606 4 203008 5 264079 6 361212 7 524618 8 796835 9 1223367 10 1865839 11 2765392 12 3935428 13 5352287 14 6933198 15 8546112 16 10018577 17 11195576 18 11972987 19 12216357 20 11957878 21 11231203 22 10150731 23 8823423 24 7410206 25 6019361 26 4736738 27 3619385 28 2686231 29 1947736 30 1379545 31 956894 32 655609 33 443752 34 301605 35 208994 36 146454 37 105760 38 79397 39 62257 40 50004 41 41190 42 35177 43 30493 44 26639 45 23486 46 20072 47 17912 48 15953 49 14289 50 12487 51 11242 52 10151 53 9109 54 8347 55 7601 56 6969 57 6588 58 5738 59 5013 60 4775 61 4433 62 3910 63 3785 64 3467 65 3262 66 2896 67 2592 68 2489 69 2366 70 2195 71 2160 72 2012 73 1834 74 1803 75 1740 76 1636 77 1529 78 1515 79 1445 80 1381 81 1344 82 1431 83 1196 84 1156 85 1148 86 1160 87 1090 88 1020 89 988 90 923 91 896 92 915 93 836 94 881 95 805 96 768 97 751 98 710 99 681 100 661 101 620 102 598 103 586 104 529 105 506 106 517 107 536 108 545 109 545 110 501 111 514 112 488 113 473 114 455 115 430 116 428 117 421 118 398 119 398 120 378 121 391 122 404 123 404 124 366 125 361 126 379 127 388 128 365 129 364 130 340 131 302 132 308 133 293 134 269 135 252 136 264 137 261 138 236 139 250 140 256 141 181 142 213 143 213 144 189 145 197 146 211 147 186 148 186 149 215 150 152 151 168 152 190 153 151 154 168 155 150 156 136 157 163 158 155 159 151 160 125 161 153 162 115 163 138 164 131 165 104 166 102 167 111 168 140 169 120 170 119 171 101 172 101 173 106 174 113 175 110 176 118 177 85 178 103 179 87 180 92 181 87 182 82 183 81 184 78 185 96 186 83 187 75 188 74 189 84 190 63 191 68 192 74 193 61 194 56 195 48 196 46 197 67 198 52 199 76 200 55 201 62 202 71 203 69 204 56 205 69 206 61 207 64 208 65 209 63 210 75 211 82 212 50 213 64 214 57 215 64 216 46 217 48 218 49 219 48 220 45 221 60 222 59 223 47 224 43 225 48 226 45 227 44 228 49 229 38 230 40 231 41 232 33 233 46 234 42 235 27 236 31 237 40 238 25 239 26 240 19 241 25 242 30 243 34 244 18 245 25 246 27 247 26 248 19 249 26 250 1964