#SentieonCommandLine: /lustre8/home/ykawai-tnproj-pg/packages/sentieon-genomics-201911/libexec/driver -t 8 -r /lustre8/home/ncbn-pg/data/resource/Homo_sapiens_assembly38.fasta --interval /lustre8/home/ncbn-pg/data/resource/picard-interval-list/GRCh38.chrX.interval_list -i SGDP/LP6005441-DNA_C08.hs38DH/LP6005441-DNA_C08.hs38DH.cram --algo WgsMetricsAlgo --min_map_qual 0 SGDP/LP6005441-DNA_C08.hs38DH/QCmetrics/LP6005441-DNA_C08.hs38DH.WgsMetrics.chrX.txt GENOME_TERRITORY MEAN_COVERAGE SD_COVERAGE MEDIAN_COVERAGE MAD_COVERAGE PCT_EXC_MAPQ PCT_EXC_DUPE PCT_EXC_UNPAIRED PCT_EXC_BASEQ PCT_EXC_OVERLAP PCT_EXC_CAPPED PCT_EXC_TOTAL PCT_1X PCT_5X PCT_10X PCT_15X PCT_20X PCT_25X PCT_30X PCT_40X PCT_50X PCT_60X PCT_70X PCT_80X PCT_90X PCT_100X HET_SNP_SENSITIVITY HET_SNP_Q 152114341 16.009 5.1024 16 3 0 0.017636 0.0015457 0.067783 0.0034793 0.00024234 0.090687 0.99892 0.99313 0.92615 0.61273 0.21279 0.040356 0.0076814 0.0016459 0.00068 0.00037622 0.00024077 0.00016353 0.00011638 8.5258e-05 0.99125 21 coverage high_quality_coverage_count 0 164797 1 129161 2 164489 3 230265 4 356871 5 601813 6 1017416 7 1704454 8 2729739 9 4134128 10 5866465 11 7809951 12 9758258 13 11481149 14 12759767 15 13396734 16 13366273 17 12676803 18 11471399 19 9925444 20 8228156 21 6549844 22 5036445 23 3734955 24 2680890 25 1872979 26 1281616 27 862549 28 572913 29 380161 30 254644 31 174139 32 123898 33 91874 34 70501 35 56478 36 46598 37 39008 38 32674 39 28271 40 24633 41 21603 42 18622 43 16432 44 14425 45 12599 46 11352 47 10204 48 8911 49 8154 50 7059 51 6206 52 5632 53 4996 54 4657 55 4245 56 3800 57 3562 58 3258 59 2793 60 2720 61 2443 62 2307 63 2247 64 2033 65 1957 66 1867 67 1765 68 1713 69 1552 70 1582 71 1414 72 1348 73 1194 74 1214 75 1097 76 1050 77 1035 78 909 79 906 80 883 81 805 82 726 83 742 84 786 85 671 86 658 87 664 88 644 89 594 90 585 91 543 92 523 93 452 94 479 95 470 96 451 97 400 98 418 99 413 100 339 101 320 102 323 103 303 104 311 105 269 106 274 107 236 108 219 109 216 110 206 111 197 112 214 113 232 114 215 115 195 116 193 117 205 118 168 119 150 120 124 121 136 122 143 123 118 124 136 125 140 126 125 127 125 128 125 129 120 130 132 131 125 132 102 133 107 134 98 135 146 136 114 137 118 138 107 139 131 140 121 141 134 142 134 143 99 144 99 145 89 146 100 147 113 148 109 149 93 150 89 151 107 152 80 153 88 154 86 155 73 156 92 157 65 158 81 159 70 160 69 161 89 162 56 163 55 164 69 165 64 166 70 167 54 168 72 169 53 170 59 171 44 172 37 173 42 174 33 175 37 176 32 177 46 178 32 179 43 180 46 181 41 182 53 183 39 184 38 185 36 186 44 187 42 188 38 189 44 190 36 191 49 192 45 193 43 194 44 195 56 196 34 197 40 198 42 199 28 200 27 201 26 202 17 203 30 204 31 205 18 206 25 207 16 208 22 209 20 210 25 211 16 212 18 213 13 214 22 215 10 216 11 217 15 218 16 219 20 220 16 221 14 222 9 223 9 224 8 225 8 226 8 227 13 228 8 229 11 230 10 231 7 232 10 233 18 234 6 235 5 236 15 237 14 238 11 239 11 240 8 241 14 242 8 243 4 244 4 245 5 246 5 247 13 248 6 249 7 250 1213