#SentieonCommandLine: /lustre8/home/ykawai-tnproj-pg/packages/sentieon-genomics-201911/libexec/driver -t 8 -r /lustre8/home/ncbn-pg/data/resource/Homo_sapiens_assembly38.fasta --interval /lustre8/home/ncbn-pg/data/resource/picard-interval-list/GRCh38.chrY.interval_list -i SGDP/LP6005441-DNA_C08.hs38DH/LP6005441-DNA_C08.hs38DH.cram --algo WgsMetricsAlgo --min_map_qual 0 SGDP/LP6005441-DNA_C08.hs38DH/QCmetrics/LP6005441-DNA_C08.hs38DH.WgsMetrics.chrY.txt
GENOME_TERRITORY	MEAN_COVERAGE	SD_COVERAGE	MEDIAN_COVERAGE	MAD_COVERAGE	PCT_EXC_MAPQ	PCT_EXC_DUPE	PCT_EXC_UNPAIRED	PCT_EXC_BASEQ	PCT_EXC_OVERLAP	PCT_EXC_CAPPED	PCT_EXC_TOTAL	PCT_1X	PCT_5X	PCT_10X	PCT_15X	PCT_20X	PCT_25X	PCT_30X	PCT_40X	PCT_50X	PCT_60X	PCT_70X	PCT_80X	PCT_90X	PCT_100X	HET_SNP_SENSITIVITY	HET_SNP_Q	
23636355	18.503	24.522	15	4	0	0.084734	0.0010515	0.054614	0.0056089	0.40426	0.55027	0.99862	0.98093	0.85855	0.55526	0.22207	0.075891	0.042185	0.028585	0.023174	0.019639	0.017114	0.015374	0.014228	0.013426	0.98227	18	

coverage	high_quality_coverage_count	
0	32513
1	38629
2	63281
3	118672
4	197632
5	300569
6	423196
7	562685
8	716491
9	889622
10	1078906
11	1276017
12	1460131
13	1620115
14	1733561
15	1772492
16	1736744
17	1629336
18	1467667
19	1269053
20	1058124
21	853022
22	664057
23	505626
24	374432
25	273700
26	196988
27	142838
28	104551
29	78614
30	60521
31	48195
32	39878
33	34138
34	29746
35	26189
36	23569
37	21315
38	19877
39	18020
40	16391
41	15257
42	14393
43	13638
44	12700
45	12095
46	11452
47	11119
48	10581
49	10261
50	9849
51	9353
52	9136
53	8650
54	8457
55	8117
56	8021
57	7696
58	7282
59	7011
60	6826
61	6538
62	6297
63	6362
64	6198
65	6098
66	5660
67	5420
68	5209
69	5055
70	4919
71	4789
72	4594
73	4424
74	4229
75	3960
76	3768
77	3623
78	3518
79	3305
80	3222
81	3020
82	2961
83	2872
84	2709
85	2664
86	2557
87	2465
88	2341
89	2284
90	2178
91	2065
92	2082
93	2006
94	1833
95	1884
96	1763
97	1794
98	1666
99	1688
100	1612
101	1575
102	1483
103	1474
104	1510
105	1412
106	1468
107	1346
108	1352
109	1347
110	1308
111	1307
112	1370
113	1263
114	1241
115	1312
116	1258
117	1228
118	1261
119	1264
120	1244
121	1209
122	1235
123	1197
124	1273
125	1220
126	1262
127	1216
128	1222
129	1185
130	1221
131	1217
132	1244
133	1223
134	1291
135	1285
136	1322
137	1259
138	1201
139	1187
140	1204
141	1189
142	1182
143	1177
144	1200
145	1194
146	1086
147	1153
148	1158
149	1095
150	1019
151	1089
152	1122
153	1122
154	1089
155	1100
156	1071
157	1083
158	1073
159	1073
160	1062
161	1127
162	1089
163	1064
164	1089
165	1081
166	1029
167	999
168	985
169	1005
170	987
171	970
172	956
173	1035
174	922
175	941
176	895
177	931
178	858
179	871
180	850
181	819
182	822
183	874
184	821
185	810
186	787
187	763
188	864
189	770
190	741
191	775
192	754
193	780
194	743
195	720
196	772
197	717
198	679
199	727
200	718
201	728
202	686
203	677
204	724
205	699
206	686
207	650
208	676
209	689
210	637
211	668
212	673
213	698
214	672
215	669
216	666
217	668
218	665
219	654
220	676
221	683
222	673
223	668
224	632
225	585
226	604
227	566
228	543
229	550
230	545
231	517
232	510
233	524
234	481
235	511
236	488
237	469
238	468
239	426
240	464
241	445
242	441
243	432
244	416
245	437
246	421
247	420
248	449
249	409
250	178215