#SentieonCommandLine: /lustre8/home/ykawai-tnproj-pg/packages/sentieon-genomics-201911/libexec/driver -t 8 -r /lustre8/home/ncbn-pg/data/resource/Homo_sapiens_assembly38.fasta --interval /lustre8/home/ncbn-pg/data/resource/picard-interval-list/GRCh38.chrY.interval_list -i SGDP/LP6005441-DNA_C09.hs38DH/LP6005441-DNA_C09.hs38DH.cram --algo WgsMetricsAlgo --min_map_qual 0 SGDP/LP6005441-DNA_C09.hs38DH/QCmetrics/LP6005441-DNA_C09.hs38DH.WgsMetrics.chrY.txt
GENOME_TERRITORY	MEAN_COVERAGE	SD_COVERAGE	MEDIAN_COVERAGE	MAD_COVERAGE	PCT_EXC_MAPQ	PCT_EXC_DUPE	PCT_EXC_UNPAIRED	PCT_EXC_BASEQ	PCT_EXC_OVERLAP	PCT_EXC_CAPPED	PCT_EXC_TOTAL	PCT_1X	PCT_5X	PCT_10X	PCT_15X	PCT_20X	PCT_25X	PCT_30X	PCT_40X	PCT_50X	PCT_60X	PCT_70X	PCT_80X	PCT_90X	PCT_100X	HET_SNP_SENSITIVITY	HET_SNP_Q	
23636355	22.415	25.101	19	4	0	0.05604	0.0019246	0.043609	0.0055826	0.32523	0.43238	0.99959	0.99798	0.97465	0.80717	0.44426	0.16265	0.063584	0.033231	0.02668	0.022487	0.019473	0.017181	0.015585	0.014583	0.99667	25	

coverage	high_quality_coverage_count	
0	9790
1	5752
2	6666
3	9941
4	15691
5	27601
6	48874
7	86702
8	146933
9	241183
10	372975
11	550447
12	767718
13	1006032
14	1261526
15	1494801
16	1673215
17	1786076
18	1828726
19	1794955
20	1695809
21	1541331
22	1346641
23	1138896
24	933535
25	745857
26	579441
27	441322
28	330578
29	244452
30	181049
31	133900
32	99622
33	75513
34	59121
35	46629
36	38413
37	31902
38	27322
39	23949
40	21265
41	19475
42	17439
43	16393
44	15436
45	14425
46	13528
47	12871
48	12327
49	11690
50	11234
51	11174
52	10684
53	10237
54	10014
55	9738
56	9475
57	9075
58	8952
59	8516
60	8346
61	8033
62	7686
63	7365
64	7101
65	6839
66	6714
67	6491
68	6370
69	6296
70	6273
71	6004
72	5802
73	5661
74	5491
75	5320
76	4977
77	4992
78	4915
79	4743
80	4596
81	4432
82	4164
83	4072
84	3834
85	3756
86	3354
87	3393
88	3150
89	2985
90	2739
91	2724
92	2530
93	2394
94	2418
95	2361
96	2286
97	2126
98	2125
99	1984
100	1958
101	1892
102	1816
103	1744
104	1667
105	1680
106	1641
107	1598
108	1581
109	1547
110	1598
111	1568
112	1446
113	1463
114	1376
115	1461
116	1391
117	1371
118	1320
119	1299
120	1267
121	1187
122	1249
123	1242
124	1224
125	1246
126	1285
127	1251
128	1213
129	1266
130	1254
131	1237
132	1274
133	1288
134	1217
135	1225
136	1203
137	1139
138	1163
139	1230
140	1147
141	1166
142	1121
143	1146
144	1159
145	1264
146	1187
147	1200
148	1197
149	1271
150	1146
151	1176
152	1159
153	1206
154	1196
155	1160
156	1133
157	1174
158	1119
159	1056
160	1131
161	1114
162	1145
163	1105
164	1118
165	1112
166	1116
167	1122
168	1154
169	1149
170	1085
171	1067
172	1079
173	1041
174	1037
175	985
176	919
177	942
178	883
179	922
180	900
181	908
182	910
183	864
184	820
185	925
186	890
187	826
188	800
189	819
190	796
191	739
192	783
193	756
194	767
195	714
196	757
197	770
198	724
199	673
200	672
201	696
202	696
203	684
204	700
205	661
206	645
207	701
208	656
209	673
210	709
211	739
212	688
213	652
214	628
215	608
216	653
217	618
218	605
219	627
220	614
221	672
222	602
223	675
224	667
225	611
226	610
227	626
228	620
229	658
230	608
231	629
232	637
233	645
234	582
235	630
236	616
237	592
238	610
239	588
240	547
241	561
242	552
243	545
244	576
245	565
246	532
247	537
248	566
249	545
250	196523