#SentieonCommandLine: /lustre8/home/ykawai-tnproj-pg/packages/sentieon-genomics-201911/libexec/driver -t 8 -r /lustre8/home/ncbn-pg/data/resource/Homo_sapiens_assembly38.fasta --interval /lustre8/home/ncbn-pg/data/resource/picard-interval-list/GRCh38.chrX.interval_list -i SGDP/LP6005441-DNA_C10.hs38DH/LP6005441-DNA_C10.hs38DH.cram --algo WgsMetricsAlgo --min_map_qual 0 SGDP/LP6005441-DNA_C10.hs38DH/QCmetrics/LP6005441-DNA_C10.hs38DH.WgsMetrics.chrX.txt GENOME_TERRITORY MEAN_COVERAGE SD_COVERAGE MEDIAN_COVERAGE MAD_COVERAGE PCT_EXC_MAPQ PCT_EXC_DUPE PCT_EXC_UNPAIRED PCT_EXC_BASEQ PCT_EXC_OVERLAP PCT_EXC_CAPPED PCT_EXC_TOTAL PCT_1X PCT_5X PCT_10X PCT_15X PCT_20X PCT_25X PCT_30X PCT_40X PCT_50X PCT_60X PCT_70X PCT_80X PCT_90X PCT_100X HET_SNP_SENSITIVITY HET_SNP_Q 152114341 18.803 5.6113 19 3 0 0.027976 0.0015489 0.049168 0.0033605 0.00014871 0.082202 0.99896 0.99513 0.96966 0.80253 0.42718 0.12672 0.024381 0.0026597 0.00098998 0.00051697 0.00032155 0.00021777 0.00015389 0.00012009 0.99493 23 coverage high_quality_coverage_count 0 158657 1 110132 2 125153 3 151254 4 195917 5 269971 6 400098 7 625362 8 1000573 9 1577590 10 2404764 11 3515871 12 4893265 13 6476670 14 8132361 15 9691492 16 11005943 17 11901363 18 12312603 19 12185271 20 11578321 21 10560956 22 9272669 23 7857957 24 6434094 25 5097319 26 3912571 27 2923516 28 2126632 29 1507288 30 1047998 31 719857 32 491258 33 333824 34 227967 35 159827 36 116012 37 86116 38 66928 39 54347 40 44755 41 38142 42 32759 43 27958 44 24776 45 21835 46 18998 47 16738 48 15063 49 12960 50 11230 51 10226 52 8795 53 7635 54 7006 55 6461 56 5800 57 5290 58 4941 59 4568 60 4200 61 3781 62 3453 63 3203 64 2903 65 2755 66 2591 67 2371 68 2244 69 2224 70 2069 71 1971 72 1818 73 1646 74 1578 75 1479 76 1382 77 1300 78 1304 79 1240 80 1164 81 1156 82 1130 83 1098 84 987 85 923 86 895 87 837 88 770 89 757 90 672 91 664 92 562 93 533 94 469 95 501 96 463 97 450 98 432 99 396 100 364 101 374 102 316 103 366 104 352 105 341 106 337 107 308 108 315 109 323 110 274 111 292 112 285 113 258 114 245 115 266 116 234 117 219 118 208 119 232 120 218 121 210 122 225 123 237 124 191 125 207 126 224 127 232 128 203 129 184 130 171 131 167 132 153 133 155 134 137 135 164 136 154 137 139 138 139 139 124 140 138 141 127 142 121 143 121 144 126 145 131 146 138 147 121 148 125 149 105 150 114 151 105 152 116 153 97 154 104 155 98 156 84 157 88 158 86 159 98 160 69 161 84 162 87 163 100 164 103 165 85 166 94 167 86 168 84 169 98 170 91 171 67 172 80 173 68 174 86 175 58 176 65 177 60 178 48 179 39 180 52 181 54 182 44 183 58 184 51 185 60 186 55 187 59 188 64 189 67 190 66 191 72 192 64 193 55 194 64 195 47 196 52 197 52 198 42 199 42 200 39 201 54 202 39 203 35 204 47 205 34 206 36 207 41 208 31 209 43 210 53 211 51 212 61 213 44 214 46 215 51 216 38 217 45 218 45 219 48 220 45 221 29 222 28 223 39 224 27 225 43 226 35 227 36 228 36 229 39 230 34 231 44 232 45 233 33 234 24 235 29 236 28 237 28 238 24 239 23 240 18 241 30 242 24 243 26 244 26 245 19 246 29 247 33 248 29 249 29 250 1996