#SentieonCommandLine: /lustre8/home/ykawai-tnproj-pg/packages/sentieon-genomics-201911/libexec/driver -t 8 -r /lustre8/home/ncbn-pg/data/resource/Homo_sapiens_assembly38.fasta --interval /lustre8/home/ncbn-pg/data/resource/picard-interval-list/GRCh38.chrY.interval_list -i SGDP/LP6005441-DNA_C10.hs38DH/LP6005441-DNA_C10.hs38DH.cram --algo WgsMetricsAlgo --min_map_qual 0 SGDP/LP6005441-DNA_C10.hs38DH/QCmetrics/LP6005441-DNA_C10.hs38DH.WgsMetrics.chrY.txt
GENOME_TERRITORY	MEAN_COVERAGE	SD_COVERAGE	MEDIAN_COVERAGE	MAD_COVERAGE	PCT_EXC_MAPQ	PCT_EXC_DUPE	PCT_EXC_UNPAIRED	PCT_EXC_BASEQ	PCT_EXC_OVERLAP	PCT_EXC_CAPPED	PCT_EXC_TOTAL	PCT_1X	PCT_5X	PCT_10X	PCT_15X	PCT_20X	PCT_25X	PCT_30X	PCT_40X	PCT_50X	PCT_60X	PCT_70X	PCT_80X	PCT_90X	PCT_100X	HET_SNP_SENSITIVITY	HET_SNP_Q	
23636355	22.538	24.695	19	4	0	0.051592	0.0013392	0.04341	0.0058331	0.30603	0.4082	0.99947	0.99727	0.97392	0.81104	0.45023	0.16703	0.069214	0.040351	0.030547	0.022982	0.018624	0.016317	0.014958	0.014043	0.9963	24	

coverage	high_quality_coverage_count	
0	12496
1	8770
2	10871
3	13248
4	19177
5	31674
6	53281
7	87919
8	145641
9	233360
10	361567
11	532097
12	743932
13	981482
14	1230884
15	1462056
16	1652730
17	1779453
18	1827554
19	1806390
20	1705855
21	1552329
22	1351474
23	1146337
24	937906
25	741855
26	575909
27	435268
28	322831
29	236031
30	171087
31	124296
32	92004
33	69766
34	54221
35	43451
36	36959
37	33131
38	29681
39	27625
40	26065
41	24769
42	23878
43	23737
44	23329
45	22766
46	22272
47	22039
48	21791
49	21097
50	20662
51	20131
52	19536
53	18780
54	18419
55	17591
56	16809
57	16427
58	15459
59	14999
60	14027
61	13179
62	12234
63	11227
64	10365
65	9492
66	8762
67	8508
68	7822
69	7376
70	6815
71	6440
72	6210
73	5814
74	5597
75	5271
76	5082
77	4681
78	4410
79	4217
80	3999
81	3758
82	3451
83	3359
84	3330
85	3168
86	2882
87	2841
88	2758
89	2582
90	2417
91	2349
92	2391
93	2247
94	2158
95	2140
96	2060
97	2052
98	1982
99	1833
100	1846
101	1821
102	1701
103	1740
104	1706
105	1702
106	1609
107	1618
108	1684
109	1632
110	1527
111	1517
112	1480
113	1517
114	1457
115	1479
116	1474
117	1443
118	1379
119	1404
120	1300
121	1398
122	1283
123	1239
124	1321
125	1261
126	1298
127	1263
128	1289
129	1303
130	1252
131	1204
132	1233
133	1202
134	1248
135	1211
136	1243
137	1284
138	1200
139	1232
140	1188
141	1182
142	1187
143	1104
144	1213
145	1215
146	1150
147	1240
148	1188
149	1191
150	1144
151	1165
152	1077
153	1118
154	1139
155	1107
156	1102
157	1092
158	1083
159	1052
160	1079
161	1101
162	1028
163	962
164	918
165	940
166	963
167	943
168	952
169	976
170	963
171	914
172	931
173	951
174	937
175	908
176	989
177	955
178	939
179	940
180	946
181	856
182	847
183	894
184	782
185	848
186	843
187	769
188	796
189	781
190	833
191	788
192	795
193	724
194	790
195	727
196	719
197	776
198	750
199	755
200	710
201	761
202	732
203	686
204	659
205	670
206	675
207	675
208	642
209	688
210	658
211	673
212	641
213	654
214	643
215	667
216	626
217	616
218	602
219	548
220	591
221	615
222	596
223	575
224	571
225	634
226	609
227	632
228	588
229	562
230	622
231	581
232	563
233	578
234	592
235	560
236	542
237	551
238	536
239	546
240	513
241	547
242	527
243	506
244	488
245	488
246	472
247	490
248	520
249	486
250	186763