#SentieonCommandLine: /lustre8/home/ykawai-tnproj-pg/packages/sentieon-genomics-201911/libexec/driver -t 8 -r /lustre8/home/ncbn-pg/data/resource/Homo_sapiens_assembly38.fasta --interval /lustre8/home/ncbn-pg/data/resource/picard-interval-list/GRCh38.chrY.interval_list -i SGDP/LP6005441-DNA_D01.hs38DH/LP6005441-DNA_D01.hs38DH.cram --algo WgsMetricsAlgo --min_map_qual 0 SGDP/LP6005441-DNA_D01.hs38DH/QCmetrics/LP6005441-DNA_D01.hs38DH.WgsMetrics.chrY.txt
GENOME_TERRITORY	MEAN_COVERAGE	SD_COVERAGE	MEDIAN_COVERAGE	MAD_COVERAGE	PCT_EXC_MAPQ	PCT_EXC_DUPE	PCT_EXC_UNPAIRED	PCT_EXC_BASEQ	PCT_EXC_OVERLAP	PCT_EXC_CAPPED	PCT_EXC_TOTAL	PCT_1X	PCT_5X	PCT_10X	PCT_15X	PCT_20X	PCT_25X	PCT_30X	PCT_40X	PCT_50X	PCT_60X	PCT_70X	PCT_80X	PCT_90X	PCT_100X	HET_SNP_SENSITIVITY	HET_SNP_Q	
23636355	23.256	25.573	19	4	0	0.057579	0.0012225	0.056419	0.0087546	0.32543	0.44941	0.99921	0.99637	0.97597	0.832	0.48145	0.18344	0.073777	0.042187	0.035333	0.029996	0.024483	0.019767	0.016905	0.015272	0.99589	24	

coverage	high_quality_coverage_count	
0	18654
1	13585
2	14611
3	17006
4	22011
5	31792
6	49431
7	78887
8	124323
9	197664
10	308667
11	458165
12	648764
13	870848
14	1116574
15	1357647
16	1569519
17	1729021
18	1811589
19	1817810
20	1748703
21	1614058
22	1435224
23	1229126
24	1016863
25	819264
26	641308
27	491760
28	368466
29	271204
30	197523
31	143409
32	104273
33	78101
34	59117
35	45756
36	37071
37	30999
38	26605
39	23808
40	21402
41	19822
42	18223
43	16894
44	15839
45	15152
46	14227
47	13773
48	13446
49	13233
50	12818
51	12626
52	12488
53	12701
54	12442
55	12518
56	12600
57	12519
58	12598
59	12843
60	12960
61	13043
62	13186
63	13083
64	13148
65	12990
66	13056
67	12999
68	13008
69	12833
70	12825
71	12433
72	12183
73	12050
74	11495
75	11128
76	10718
77	10079
78	9419
79	9123
80	8600
81	8248
82	7759
83	7210
84	6900
85	6622
86	6221
87	5806
88	5263
89	5035
90	4808
91	4547
92	4295
93	4161
94	3932
95	3747
96	3487
97	3340
98	3297
99	2968
100	3000
101	2852
102	2707
103	2580
104	2546
105	2491
106	2370
107	2282
108	2211
109	2119
110	2017
111	1982
112	1999
113	1909
114	1929
115	1904
116	1871
117	1807
118	1763
119	1597
120	1601
121	1559
122	1606
123	1572
124	1599
125	1594
126	1638
127	1486
128	1428
129	1420
130	1411
131	1421
132	1336
133	1277
134	1276
135	1227
136	1200
137	1248
138	1241
139	1216
140	1197
141	1203
142	1208
143	1173
144	1179
145	1196
146	1194
147	1180
148	1152
149	1095
150	1058
151	1019
152	1059
153	1090
154	959
155	1049
156	1051
157	991
158	991
159	999
160	1065
161	982
162	998
163	1115
164	1035
165	1012
166	1029
167	1000
168	1098
169	1048
170	1013
171	1025
172	956
173	994
174	950
175	956
176	997
177	940
178	1009
179	925
180	1001
181	959
182	921
183	972
184	970
185	927
186	911
187	944
188	898
189	873
190	909
191	891
192	877
193	863
194	836
195	890
196	839
197	859
198	808
199	778
200	752
201	796
202	800
203	736
204	744
205	707
206	752
207	667
208	667
209	685
210	666
211	667
212	678
213	674
214	674
215	675
216	673
217	628
218	648
219	655
220	607
221	701
222	694
223	719
224	667
225	642
226	649
227	643
228	673
229	661
230	642
231	645
232	609
233	627
234	633
235	601
236	597
237	547
238	576
239	580
240	543
241	581
242	558
243	572
244	547
245	550
246	529
247	518
248	550
249	574
250	196393