#SentieonCommandLine: /lustre8/home/ykawai-tnproj-pg/packages/sentieon-genomics-201911/libexec/driver -t 8 -r /lustre8/home/ncbn-pg/data/resource/Homo_sapiens_assembly38.fasta --interval /lustre8/home/ncbn-pg/data/resource/picard-interval-list/GRCh38.chrX.interval_list -i SGDP/LP6005441-DNA_D04.hs38DH/LP6005441-DNA_D04.hs38DH.cram --algo WgsMetricsAlgo --min_map_qual 0 SGDP/LP6005441-DNA_D04.hs38DH/QCmetrics/LP6005441-DNA_D04.hs38DH.WgsMetrics.chrX.txt
GENOME_TERRITORY	MEAN_COVERAGE	SD_COVERAGE	MEDIAN_COVERAGE	MAD_COVERAGE	PCT_EXC_MAPQ	PCT_EXC_DUPE	PCT_EXC_UNPAIRED	PCT_EXC_BASEQ	PCT_EXC_OVERLAP	PCT_EXC_CAPPED	PCT_EXC_TOTAL	PCT_1X	PCT_5X	PCT_10X	PCT_15X	PCT_20X	PCT_25X	PCT_30X	PCT_40X	PCT_50X	PCT_60X	PCT_70X	PCT_80X	PCT_90X	PCT_100X	HET_SNP_SENSITIVITY	HET_SNP_Q	
152114341	34.717	8.2885	35	5	0	0.012971	0.0019011	0.049398	0.0074556	0.00021926	0.071945	0.99937	0.99706	0.992	0.98448	0.97041	0.92506	0.78411	0.24604	0.020161	0.002681	0.0015642	0.0011017	0.00083059	0.00064386	0.99803	27	

coverage	high_quality_coverage_count	
0	95660
1	69394
2	79890
3	94191
4	107659
5	124357
6	140313
7	153809
8	169388
9	182802
10	194451
11	209485
12	226754
13	243742
14	268937
15	300045
16	344424
17	404011
18	485917
19	606582
20	770368
21	993399
22	1290215
23	1678334
24	2165070
25	2757904
26	3453499
27	4232184
28	5070083
29	5927845
30	6772877
31	7532993
32	8183252
33	8657799
34	8943145
35	9015762
36	8870847
37	8519756
38	7999140
39	7352057
40	6606071
41	5813902
42	5007693
43	4221264
44	3488734
45	2830612
46	2253281
47	1759699
48	1354057
49	1023920
50	762261
51	559658
52	407164
53	291041
54	207862
55	148573
56	107112
57	77259
58	56242
59	41780
60	31998
61	25166
62	20650
63	17908
64	15831
65	13726
66	12643
67	11549
68	10642
69	9761
70	9232
71	8407
72	8032
73	7691
74	7214
75	6557
76	6258
77	5902
78	5710
79	5358
80	5171
81	4798
82	4508
83	4406
84	4202
85	4042
86	3816
87	3550
88	3380
89	3364
90	3200
91	3227
92	2960
93	2946
94	2936
95	2719
96	2752
97	2724
98	2538
99	2402
100	2459
101	2365
102	2322
103	2310
104	2261
105	2223
106	2075
107	1981
108	2005
109	1968
110	1846
111	1761
112	1667
113	1675
114	1573
115	1496
116	1504
117	1511
118	1343
119	1373
120	1275
121	1230
122	1185
123	1177
124	1115
125	1124
126	1082
127	1085
128	1048
129	1013
130	1009
131	885
132	978
133	887
134	935
135	857
136	886
137	932
138	867
139	841
140	749
141	821
142	744
143	710
144	695
145	679
146	698
147	692
148	629
149	604
150	594
151	607
152	597
153	550
154	539
155	451
156	464
157	473
158	432
159	431
160	401
161	398
162	386
163	423
164	368
165	361
166	357
167	366
168	348
169	368
170	350
171	368
172	350
173	312
174	339
175	310
176	322
177	319
178	302
179	305
180	263
181	262
182	262
183	264
184	257
185	273
186	253
187	243
188	239
189	232
190	227
191	217
192	197
193	211
194	208
195	201
196	204
197	184
198	185
199	183
200	186
201	192
202	199
203	191
204	200
205	186
206	184
207	205
208	199
209	169
210	193
211	185
212	184
213	158
214	157
215	181
216	149
217	150
218	164
219	125
220	162
221	146
222	132
223	160
224	132
225	136
226	135
227	160
228	120
229	143
230	136
231	148
232	116
233	117
234	117
235	132
236	128
237	122
238	116
239	99
240	114
241	103
242	90
243	90
244	82
245	104
246	108
247	93
248	91
249	103
250	8842