#SentieonCommandLine: /lustre8/home/ykawai-tnproj-pg/packages/sentieon-genomics-201911/libexec/driver -t 8 -r /lustre8/home/ncbn-pg/data/resource/Homo_sapiens_assembly38.fasta --interval /lustre8/home/ncbn-pg/data/resource/picard-interval-list/GRCh38.chrX.interval_list -i SGDP/LP6005441-DNA_D06.hs38DH/LP6005441-DNA_D06.hs38DH.cram --algo WgsMetricsAlgo --min_map_qual 0 SGDP/LP6005441-DNA_D06.hs38DH/QCmetrics/LP6005441-DNA_D06.hs38DH.WgsMetrics.chrX.txt
GENOME_TERRITORY	MEAN_COVERAGE	SD_COVERAGE	MEDIAN_COVERAGE	MAD_COVERAGE	PCT_EXC_MAPQ	PCT_EXC_DUPE	PCT_EXC_UNPAIRED	PCT_EXC_BASEQ	PCT_EXC_OVERLAP	PCT_EXC_CAPPED	PCT_EXC_TOTAL	PCT_1X	PCT_5X	PCT_10X	PCT_15X	PCT_20X	PCT_25X	PCT_30X	PCT_40X	PCT_50X	PCT_60X	PCT_70X	PCT_80X	PCT_90X	PCT_100X	HET_SNP_SENSITIVITY	HET_SNP_Q	
152114341	37.958	8.4627	38	5	0	0.027166	0.0018964	0.036474	0.008787	8.6518e-05	0.074411	0.99943	0.99814	0.99574	0.99164	0.9837	0.96045	0.88094	0.41295	0.057865	0.0063287	0.0027911	0.0016745	0.0010558	0.00070645	0.99872	29	

coverage	high_quality_coverage_count	
0	86742
1	44840
2	46258
3	49164
4	55255
5	59316
6	65897
7	70530
8	80882
9	89286
10	99868
11	110779
12	123059
13	136779
14	153155
15	171748
16	197628
17	230815
18	274567
19	332722
20	412644
21	515444
22	657019
23	849534
24	1101912
25	1427394
26	1836457
27	2332981
28	2915102
29	3583600
30	4316127
31	5093302
32	5873494
33	6630873
34	7318800
35	7887184
36	8317645
37	8572329
38	8649047
39	8528393
40	8232887
41	7784792
42	7190570
43	6517875
44	5802726
45	5064854
46	4332894
47	3639271
48	3008179
49	2439578
50	1952292
51	1536357
52	1189449
53	911667
54	688732
55	519837
56	387264
57	286253
58	210772
59	156837
60	118108
61	90432
62	70456
63	56125
64	47036
65	39603
66	34188
67	30222
68	27246
69	24709
70	22775
71	21128
72	19575
73	18332
74	16985
75	15770
76	14871
77	14013
78	13563
79	12826
80	12002
81	11200
82	10688
83	10058
84	9520
85	9140
86	8675
87	8139
88	7597
89	7096
90	6836
91	6329
92	6108
93	5671
94	5475
95	5106
96	4777
97	4533
98	4196
99	4114
100	3801
101	3595
102	3406
103	3244
104	3015
105	2828
106	2753
107	2604
108	2586
109	2561
110	2351
111	2289
112	2237
113	2180
114	2024
115	1931
116	1849
117	1786
118	1669
119	1660
120	1513
121	1552
122	1471
123	1448
124	1374
125	1345
126	1299
127	1232
128	1229
129	1091
130	1099
131	1012
132	1000
133	956
134	857
135	887
136	824
137	830
138	823
139	804
140	766
141	692
142	650
143	732
144	662
145	678
146	625
147	632
148	570
149	625
150	546
151	526
152	597
153	574
154	523
155	514
156	479
157	447
158	439
159	487
160	460
161	434
162	423
163	402
164	395
165	384
166	381
167	353
168	333
169	352
170	346
171	310
172	346
173	324
174	317
175	301
176	306
177	303
178	272
179	294
180	284
181	242
182	252
183	234
184	216
185	225
186	231
187	224
188	205
189	178
190	181
191	202
192	169
193	162
194	175
195	164
196	139
197	166
198	155
199	173
200	183
201	166
202	171
203	164
204	161
205	161
206	130
207	174
208	155
209	153
210	129
211	155
212	112
213	142
214	129
215	115
216	125
217	122
218	141
219	132
220	137
221	105
222	128
223	146
224	95
225	108
226	94
227	101
228	94
229	106
230	94
231	99
232	108
233	100
234	91
235	95
236	106
237	98
238	114
239	99
240	102
241	86
242	83
243	103
244	91
245	68
246	95
247	79
248	99
249	101
250	5724