#SentieonCommandLine: /lustre8/home/ykawai-tnproj-pg/packages/sentieon-genomics-201911/libexec/driver -t 8 -r /lustre8/home/ncbn-pg/data/resource/Homo_sapiens_assembly38.fasta --interval /lustre8/home/ncbn-pg/data/resource/picard-interval-list/GRCh38.chrX.interval_list -i SGDP/LP6005441-DNA_D08.hs38DH/LP6005441-DNA_D08.hs38DH.cram --algo WgsMetricsAlgo --min_map_qual 0 SGDP/LP6005441-DNA_D08.hs38DH/QCmetrics/LP6005441-DNA_D08.hs38DH.WgsMetrics.chrX.txt GENOME_TERRITORY MEAN_COVERAGE SD_COVERAGE MEDIAN_COVERAGE MAD_COVERAGE PCT_EXC_MAPQ PCT_EXC_DUPE PCT_EXC_UNPAIRED PCT_EXC_BASEQ PCT_EXC_OVERLAP PCT_EXC_CAPPED PCT_EXC_TOTAL PCT_1X PCT_5X PCT_10X PCT_15X PCT_20X PCT_25X PCT_30X PCT_40X PCT_50X PCT_60X PCT_70X PCT_80X PCT_90X PCT_100X HET_SNP_SENSITIVITY HET_SNP_Q 152114341 32.294 7.9726 32 5 0 0.023893 0.00088728 0.069854 0.005005 0.00010186 0.099742 0.99947 0.99756 0.99356 0.98484 0.9577 0.86672 0.65821 0.15295 0.010841 0.0019271 0.0011248 0.00076512 0.00054659 0.00040685 0.99831 28 coverage high_quality_coverage_count 0 80533 1 63099 2 67025 3 76014 4 84997 5 94177 6 104548 7 118734 8 135420 9 155033 10 180401 11 211526 12 252559 13 305250 14 376276 15 471018 16 598123 17 770332 18 997559 19 1291607 20 1664941 21 2127540 22 2680133 23 3322963 24 4043560 25 4812752 26 5614603 27 6399990 28 7127493 29 7762892 30 8267899 31 8607394 32 8761542 33 8713172 34 8480857 35 8079918 36 7533516 37 6880512 38 6147534 39 5385469 40 4630708 41 3902288 42 3230758 43 2622962 44 2092659 45 1646587 46 1271398 47 965988 48 721168 49 531892 50 389116 51 282227 52 202170 53 145854 54 103866 55 75946 56 55680 57 42248 58 32951 59 25831 60 21530 61 17882 62 15150 63 13068 64 11341 65 10138 66 9229 67 8542 68 7809 69 7347 70 7004 71 6466 72 6185 73 5975 74 5449 75 5107 76 5031 77 4800 78 4494 79 4201 80 4152 81 3790 82 3696 83 3474 84 3430 85 3193 86 3065 87 2912 88 2789 89 2740 90 2554 91 2544 92 2362 93 2216 94 2175 95 1980 96 2050 97 1920 98 1831 99 1625 100 1548 101 1555 102 1415 103 1390 104 1323 105 1310 106 1244 107 1129 108 1137 109 1179 110 1125 111 1098 112 1033 113 979 114 1004 115 918 116 913 117 934 118 896 119 885 120 776 121 774 122 756 123 711 124 688 125 649 126 620 127 623 128 569 129 568 130 628 131 630 132 509 133 509 134 517 135 499 136 448 137 493 138 516 139 487 140 419 141 424 142 436 143 461 144 368 145 369 146 403 147 398 148 358 149 371 150 376 151 386 152 391 153 341 154 371 155 350 156 352 157 350 158 350 159 313 160 325 161 295 162 302 163 301 164 323 165 273 166 277 167 298 168 242 169 257 170 240 171 240 172 223 173 246 174 219 175 222 176 248 177 207 178 218 179 235 180 238 181 213 182 220 183 200 184 178 185 204 186 181 187 180 188 212 189 187 190 180 191 180 192 148 193 181 194 159 195 172 196 161 197 180 198 133 199 146 200 152 201 151 202 150 203 152 204 142 205 116 206 131 207 112 208 106 209 114 210 123 211 123 212 103 213 100 214 112 215 96 216 104 217 89 218 84 219 98 220 85 221 98 222 76 223 91 224 77 225 96 226 80 227 87 228 83 229 88 230 73 231 79 232 83 233 86 234 97 235 79 236 82 237 96 238 102 239 69 240 83 241 97 242 85 243 77 244 70 245 62 246 75 247 71 248 63 249 83 250 5640