#SentieonCommandLine: /lustre8/home/ykawai-tnproj-pg/packages/sentieon-genomics-201911/libexec/driver -t 8 -r /lustre8/home/ncbn-pg/data/resource/Homo_sapiens_assembly38.fasta --interval /lustre8/home/ncbn-pg/data/resource/picard-interval-list/GRCh38.autosome-PAR.interval_list -i SGDP/LP6005441-DNA_F01.hs38DH/LP6005441-DNA_F01.hs38DH.cram --algo WgsMetricsAlgo --min_map_qual 0 SGDP/LP6005441-DNA_F01.hs38DH/QCmetrics/LP6005441-DNA_F01.hs38DH.WgsMetrics.autosome.txt GENOME_TERRITORY MEAN_COVERAGE SD_COVERAGE MEDIAN_COVERAGE MAD_COVERAGE PCT_EXC_MAPQ PCT_EXC_DUPE PCT_EXC_UNPAIRED PCT_EXC_BASEQ PCT_EXC_OVERLAP PCT_EXC_CAPPED PCT_EXC_TOTAL PCT_1X PCT_5X PCT_10X PCT_15X PCT_20X PCT_25X PCT_30X PCT_40X PCT_50X PCT_60X PCT_70X PCT_80X PCT_90X PCT_100X HET_SNP_SENSITIVITY HET_SNP_Q 2747965384 38.621 12.055 38 5 0 0.019757 0.0018028 0.044482 0.0060637 0.014117 0.086223 0.99865 0.99634 0.99376 0.9901 0.98195 0.95716 0.87698 0.4308 0.073282 0.012175 0.0072763 0.0055706 0.0044404 0.0036494 0.99743 26 coverage high_quality_coverage_count 0 3720518 1 1880380 2 1578867 3 1466629 4 1405739 5 1382657 6 1382990 7 1392115 8 1425349 9 1499251 10 1604166 11 1747556 12 1949169 13 2218444 14 2561596 15 3005479 16 3564637 17 4270784 18 5179355 19 6369091 20 7932466 21 10007637 22 12770246 23 16380368 24 21020609 25 26874451 26 34088435 27 42718231 28 52713213 29 63951417 30 76150970 31 88928894 32 101821496 33 114189846 34 125404404 35 134916675 36 142192445 37 146773514 38 148472707 39 147234126 40 143142657 41 136469733 42 127671338 43 117266349 44 105737137 45 93671529 46 81490814 47 69728143 48 58668237 49 48595629 50 39630391 51 31845682 52 25239128 53 19747575 54 15263220 55 11686072 56 8882514 57 6717896 58 5070026 59 3837565 60 2926616 61 2258724 62 1770879 63 1419108 64 1168719 65 986678 66 856089 67 758862 68 686946 69 629146 70 586175 71 548660 72 519574 73 493057 74 472060 75 449152 76 429981 77 412241 78 396186 79 380172 80 366163 81 351863 82 337932 83 326193 84 313206 85 303070 86 292654 87 280967 88 271079 89 262716 90 252554 91 243375 92 235333 93 226928 94 219693 95 212517 96 204818 97 198482 98 193328 99 186557 100 180932 101 175224 102 169371 103 164487 104 159914 105 154864 106 150323 107 146010 108 141612 109 137937 110 133575 111 130145 112 125999 113 122791 114 119264 115 116037 116 113028 117 109563 118 106533 119 103494 120 100988 121 98501 122 95497 123 94231 124 91005 125 89273 126 86943 127 85456 128 83556 129 81430 130 79384 131 78079 132 75843 133 74369 134 73116 135 71772 136 69734 137 68584 138 67254 139 65404 140 64162 141 62926 142 62317 143 61103 144 59822 145 58746 146 57518 147 56404 148 55307 149 54933 150 53635 151 53090 152 52529 153 51474 154 50824 155 50341 156 49349 157 48583 158 47993 159 47040 160 46205 161 45584 162 44768 163 44435 164 43560 165 42773 166 42226 167 41156 168 40892 169 40375 170 39843 171 39093 172 38740 173 37958 174 37612 175 37374 176 36434 177 35903 178 35369 179 34497 180 34402 181 33477 182 33618 183 32428 184 31920 185 31159 186 30992 187 30537 188 29867 189 29145 190 29138 191 28825 192 28366 193 27694 194 27078 195 26866 196 26630 197 26025 198 25405 199 25519 200 25148 201 24414 202 24468 203 24035 204 23655 205 23101 206 22926 207 22401 208 21929 209 21091 210 21103 211 20885 212 20435 213 20218 214 20167 215 19826 216 19547 217 19028 218 18960 219 18601 220 18680 221 18697 222 17996 223 18069 224 17207 225 17057 226 16893 227 16912 228 16668 229 16323 230 15991 231 15930 232 15883 233 15521 234 15482 235 15071 236 15152 237 15216 238 14635 239 14581 240 14280 241 14200 242 14048 243 13902 244 13957 245 13520 246 13672 247 13565 248 13078 249 12808 250 2247936