#SentieonCommandLine: /lustre8/home/ykawai-tnproj-pg/packages/sentieon-genomics-201911/libexec/driver -t 8 -r /lustre8/home/ncbn-pg/data/resource/Homo_sapiens_assembly38.fasta --interval /lustre8/home/ncbn-pg/data/resource/picard-interval-list/GRCh38.autosome-PAR.interval_list -i SGDP/LP6005441-DNA_F03.hs38DH/LP6005441-DNA_F03.hs38DH.cram --algo WgsMetricsAlgo --min_map_qual 0 SGDP/LP6005441-DNA_F03.hs38DH/QCmetrics/LP6005441-DNA_F03.hs38DH.WgsMetrics.autosome.txt GENOME_TERRITORY MEAN_COVERAGE SD_COVERAGE MEDIAN_COVERAGE MAD_COVERAGE PCT_EXC_MAPQ PCT_EXC_DUPE PCT_EXC_UNPAIRED PCT_EXC_BASEQ PCT_EXC_OVERLAP PCT_EXC_CAPPED PCT_EXC_TOTAL PCT_1X PCT_5X PCT_10X PCT_15X PCT_20X PCT_25X PCT_30X PCT_40X PCT_50X PCT_60X PCT_70X PCT_80X PCT_90X PCT_100X HET_SNP_SENSITIVITY HET_SNP_Q 2747965384 37.994 11.343 38 5 0 0.022245 0.0014134 0.044 0.0071615 0.012477 0.087297 0.99878 0.99666 0.99409 0.99027 0.98166 0.95407 0.86432 0.40088 0.063872 0.010312 0.0059981 0.0044714 0.0034953 0.0028431 0.99766 26 coverage high_quality_coverage_count 0 3343726 1 1688531 2 1444566 3 1362309 4 1337817 5 1333187 6 1348770 7 1391207 8 1451130 9 1536875 10 1657320 11 1823419 12 2039689 13 2317523 14 2672871 15 3126448 16 3720112 17 4482465 18 5482738 19 6823450 20 8613891 21 11006085 22 14184208 23 18344429 24 23688856 25 30351164 26 38446248 27 47998689 28 58889437 29 70931969 30 83747872 31 96823639 32 109653339 33 121573195 34 131948580 35 140218580 36 145996358 37 148907508 38 148834905 39 145829389 40 140088824 41 132084218 42 122213429 43 111032757 44 99068337 45 86841326 46 74851094 47 63443591 48 52938314 49 43513696 50 35194585 51 28103545 52 22125540 53 17226532 54 13255265 55 10120425 56 7669430 57 5791906 58 4374507 59 3317839 60 2535523 61 1967122 62 1554290 63 1254261 64 1038886 65 880800 66 765325 67 679546 68 615162 69 564186 70 524675 71 492178 72 465553 73 442093 74 422169 75 402961 76 385735 77 369543 78 352658 79 337798 80 323562 81 310274 82 297467 83 284381 84 271056 85 259719 86 248591 87 238232 88 229564 89 219486 90 211104 91 202030 92 194753 93 187306 94 181638 95 174921 96 168682 97 162467 98 157473 99 151819 100 146240 101 141094 102 136209 103 131204 104 127272 105 123814 106 119014 107 115710 108 111775 109 108158 110 105024 111 102330 112 99329 113 96947 114 93793 115 91294 116 88400 117 85995 118 83369 119 80744 120 79534 121 77511 122 76144 123 74212 124 72160 125 70055 126 68994 127 67323 128 65397 129 63989 130 62385 131 60814 132 59285 133 57506 134 56056 135 54866 136 53701 137 52430 138 51225 139 49594 140 48802 141 47759 142 46163 143 45382 144 44579 145 44151 146 42884 147 42187 148 40799 149 39879 150 39439 151 38668 152 37848 153 37035 154 36474 155 35973 156 35416 157 34920 158 34440 159 33541 160 33605 161 32898 162 32203 163 31941 164 30621 165 30588 166 30387 167 29601 168 28892 169 28278 170 27927 171 27758 172 27182 173 26823 174 26246 175 25882 176 25011 177 24850 178 24407 179 24007 180 23897 181 23568 182 22911 183 22575 184 22396 185 22091 186 21994 187 21471 188 21204 189 21323 190 20681 191 20326 192 19930 193 19712 194 19507 195 19191 196 19292 197 19098 198 18758 199 18388 200 18518 201 18040 202 17678 203 17463 204 17529 205 16985 206 16890 207 16943 208 16426 209 16162 210 15901 211 15790 212 15702 213 15250 214 15190 215 15155 216 14938 217 14651 218 14554 219 14269 220 13948 221 13872 222 13674 223 13778 224 13321 225 13037 226 12768 227 12702 228 12682 229 12465 230 12553 231 12194 232 12141 233 11846 234 11712 235 11613 236 11627 237 11319 238 11319 239 10944 240 10999 241 10704 242 10634 243 10537 244 10492 245 10244 246 10106 247 10134 248 9768 249 9699 250 1881220