#SentieonCommandLine: /lustre8/home/ykawai-tnproj-pg/packages/sentieon-genomics-201911/libexec/driver -t 8 -r /lustre8/home/ncbn-pg/data/resource/Homo_sapiens_assembly38.fasta --interval /lustre8/home/ncbn-pg/data/resource/picard-interval-list/GRCh38.chrX.interval_list -i SGDP/LP6005441-DNA_F03.hs38DH/LP6005441-DNA_F03.hs38DH.cram --algo WgsMetricsAlgo --min_map_qual 0 SGDP/LP6005441-DNA_F03.hs38DH/QCmetrics/LP6005441-DNA_F03.hs38DH.WgsMetrics.chrX.txt
GENOME_TERRITORY	MEAN_COVERAGE	SD_COVERAGE	MEDIAN_COVERAGE	MAD_COVERAGE	PCT_EXC_MAPQ	PCT_EXC_DUPE	PCT_EXC_UNPAIRED	PCT_EXC_BASEQ	PCT_EXC_OVERLAP	PCT_EXC_CAPPED	PCT_EXC_TOTAL	PCT_1X	PCT_5X	PCT_10X	PCT_15X	PCT_20X	PCT_25X	PCT_30X	PCT_40X	PCT_50X	PCT_60X	PCT_70X	PCT_80X	PCT_90X	PCT_100X	HET_SNP_SENSITIVITY	HET_SNP_Q	
152114341	37.304	8.7091	37	5	0	0.017193	0.0013695	0.041067	0.0070731	0.0002444	0.066947	0.99955	0.9983	0.99584	0.99165	0.98268	0.95412	0.85959	0.37729	0.050092	0.0051149	0.0023452	0.0015704	0.0011765	0.00092216	0.99884	29	

coverage	high_quality_coverage_count	
0	68888
1	42999
2	44258
3	48244
4	53868
5	60549
6	66956
7	73065
8	82309
9	91621
10	99729
11	111208
12	125529
13	140792
14	160437
15	186476
16	216682
17	257666
18	314262
19	388441
20	488355
21	627333
22	810480
23	1054646
24	1364037
25	1756787
26	2233319
27	2797619
28	3443187
29	4148796
30	4895723
31	5657558
32	6393592
33	7078295
34	7658675
35	8104294
36	8393907
37	8518162
38	8448175
39	8216368
40	7831970
41	7311140
42	6706997
43	6015616
44	5304355
45	4590845
46	3902235
47	3262586
48	2679385
49	2166162
50	1723136
51	1354656
52	1043635
53	794938
54	596777
55	446576
56	329707
57	243329
58	178161
59	130798
60	96901
61	73381
62	55750
63	44006
64	35642
65	29779
66	25762
67	22363
68	19813
69	17907
70	16303
71	14945
72	14112
73	13135
74	11815
75	11089
76	10189
77	9529
78	8663
79	8080
80	7512
81	7225
82	6782
83	6389
84	5987
85	5703
86	5470
87	5071
88	5100
89	4683
90	4669
91	4471
92	4086
93	4199
94	3829
95	3619
96	3623
97	3473
98	3427
99	3294
100	3192
101	2990
102	2992
103	2900
104	2795
105	2779
106	2807
107	2785
108	2681
109	2662
110	2653
111	2571
112	2529
113	2477
114	2424
115	2372
116	2276
117	2253
118	2234
119	2109
120	2121
121	2026
122	1996
123	1944
124	1905
125	1802
126	1828
127	1758
128	1688
129	1669
130	1492
131	1457
132	1426
133	1349
134	1263
135	1231
136	1189
137	1210
138	1091
139	1035
140	1005
141	940
142	961
143	949
144	903
145	862
146	835
147	808
148	784
149	800
150	708
151	754
152	657
153	685
154	643
155	641
156	611
157	580
158	567
159	553
160	562
161	496
162	548
163	527
164	555
165	577
166	516
167	483
168	479
169	486
170	467
171	481
172	431
173	407
174	417
175	406
176	432
177	429
178	388
179	417
180	386
181	341
182	385
183	349
184	363
185	327
186	310
187	335
188	364
189	304
190	337
191	299
192	317
193	289
194	306
195	306
196	293
197	283
198	310
199	304
200	328
201	284
202	271
203	305
204	277
205	247
206	256
207	258
208	270
209	266
210	269
211	247
212	277
213	270
214	236
215	238
216	235
217	211
218	224
219	218
220	230
221	218
222	215
223	180
224	197
225	201
226	194
227	211
228	185
229	200
230	196
231	186
232	198
233	189
234	196
235	181
236	190
237	176
238	176
239	190
240	172
241	156
242	171
243	157
244	183
245	183
246	148
247	162
248	164
249	146
250	14317