#SentieonCommandLine: /lustre8/home/ykawai-tnproj-pg/packages/sentieon-genomics-201911/libexec/driver -t 8 -r /lustre8/home/ncbn-pg/data/resource/Homo_sapiens_assembly38.fasta --interval /lustre8/home/ncbn-pg/data/resource/picard-interval-list/GRCh38.chrX.interval_list -i SGDP/LP6005441-DNA_F05.hs38DH/LP6005441-DNA_F05.hs38DH.cram --algo WgsMetricsAlgo --min_map_qual 0 SGDP/LP6005441-DNA_F05.hs38DH/QCmetrics/LP6005441-DNA_F05.hs38DH.WgsMetrics.chrX.txt
GENOME_TERRITORY	MEAN_COVERAGE	SD_COVERAGE	MEDIAN_COVERAGE	MAD_COVERAGE	PCT_EXC_MAPQ	PCT_EXC_DUPE	PCT_EXC_UNPAIRED	PCT_EXC_BASEQ	PCT_EXC_OVERLAP	PCT_EXC_CAPPED	PCT_EXC_TOTAL	PCT_1X	PCT_5X	PCT_10X	PCT_15X	PCT_20X	PCT_25X	PCT_30X	PCT_40X	PCT_50X	PCT_60X	PCT_70X	PCT_80X	PCT_90X	PCT_100X	HET_SNP_SENSITIVITY	HET_SNP_Q	
152114341	29.797	7.5026	30	4	0	0.021271	0.0013573	0.046927	0.0055082	0.00017895	0.075243	0.99903	0.99677	0.99267	0.98357	0.94433	0.79737	0.5091	0.068367	0.0075243	0.0030795	0.0015734	0.00090618	0.00058054	0.00039685	0.99773	26	

coverage	high_quality_coverage_count	
0	148192
1	84809
2	81693
3	84908
4	92251
5	101031
6	109097
7	121883
8	136892
9	153805
10	176144
11	209218
12	254945
13	320347
14	423421
15	572805
16	789699
17	1090624
18	1495845
19	2020247
20	2688927
21	3487414
22	4396215
23	5381568
24	6400551
25	7381000
26	8266833
27	8984493
28	9484191
29	9733435
30	9705722
31	9414558
32	8900851
33	8201979
34	7365808
35	6459930
36	5528637
37	4627396
38	3795367
39	3041998
40	2402291
41	1857138
42	1413946
43	1062669
44	789067
45	581310
46	427192
47	313236
48	232586
49	175627
50	133602
51	105836
52	86089
53	72356
54	61705
55	53594
56	47232
57	42274
58	38437
59	34993
60	32344
61	29651
62	27633
63	25216
64	23227
65	21317
66	19702
67	18119
68	16584
69	15300
70	14023
71	12689
72	11552
73	10958
74	10210
75	9615
76	9130
77	8298
78	7783
79	7238
80	6642
81	6082
82	5656
83	5384
84	4910
85	4645
86	4400
87	4152
88	4019
89	3644
90	3508
91	3440
92	3111
93	2950
94	2782
95	2677
96	2435
97	2389
98	2427
99	2223
100	2134
101	1996
102	1935
103	1717
104	1597
105	1528
106	1421
107	1408
108	1276
109	1224
110	1228
111	1140
112	1151
113	1071
114	1009
115	1034
116	979
117	896
118	976
119	896
120	775
121	826
122	761
123	827
124	746
125	719
126	727
127	730
128	690
129	690
130	653
131	680
132	647
133	611
134	574
135	506
136	457
137	490
138	425
139	403
140	427
141	391
142	396
143	388
144	394
145	381
146	366
147	327
148	361
149	332
150	345
151	339
152	355
153	344
154	304
155	317
156	278
157	277
158	269
159	233
160	266
161	244
162	240
163	270
164	267
165	263
166	223
167	219
168	205
169	204
170	177
171	213
172	201
173	208
174	177
175	183
176	171
177	168
178	187
179	155
180	164
181	127
182	146
183	144
184	143
185	134
186	122
187	120
188	119
189	119
190	119
191	120
192	110
193	109
194	97
195	120
196	113
197	103
198	119
199	101
200	101
201	108
202	109
203	104
204	86
205	102
206	75
207	94
208	87
209	69
210	70
211	72
212	77
213	67
214	84
215	85
216	72
217	74
218	61
219	51
220	55
221	54
222	59
223	56
224	44
225	52
226	59
227	55
228	57
229	66
230	58
231	57
232	54
233	62
234	50
235	49
236	44
237	46
238	37
239	35
240	43
241	42
242	44
243	44
244	34
245	40
246	30
247	31
248	33
249	40
250	4222