#SentieonCommandLine: /lustre8/home/ykawai-tnproj-pg/packages/sentieon-genomics-201911/libexec/driver -t 8 -r /lustre8/home/ncbn-pg/data/resource/Homo_sapiens_assembly38.fasta --interval /lustre8/home/ncbn-pg/data/resource/picard-interval-list/GRCh38.autosome-PAR.interval_list -i SGDP/LP6005441-DNA_F07.hs38DH/LP6005441-DNA_F07.hs38DH.cram --algo WgsMetricsAlgo --min_map_qual 0 SGDP/LP6005441-DNA_F07.hs38DH/QCmetrics/LP6005441-DNA_F07.hs38DH.WgsMetrics.autosome.txt GENOME_TERRITORY MEAN_COVERAGE SD_COVERAGE MEDIAN_COVERAGE MAD_COVERAGE PCT_EXC_MAPQ PCT_EXC_DUPE PCT_EXC_UNPAIRED PCT_EXC_BASEQ PCT_EXC_OVERLAP PCT_EXC_CAPPED PCT_EXC_TOTAL PCT_1X PCT_5X PCT_10X PCT_15X PCT_20X PCT_25X PCT_30X PCT_40X PCT_50X PCT_60X PCT_70X PCT_80X PCT_90X PCT_100X HET_SNP_SENSITIVITY HET_SNP_Q 2747965384 36.059 11.243 36 5 0 0.018813 0.00088347 0.044968 0.0050057 0.01434 0.08401 0.99837 0.99593 0.99316 0.98895 0.97851 0.94038 0.81562 0.29143 0.033852 0.0084789 0.0058427 0.0044548 0.0035656 0.0029393 0.99706 25 coverage high_quality_coverage_count 0 4476191 1 1994843 2 1666023 3 1549204 4 1494263 5 1463941 6 1471847 7 1492834 8 1545015 9 1636623 10 1780011 11 1972720 12 2233164 13 2575133 14 3011857 15 3588348 16 4340667 17 5363752 18 6745866 19 8644210 20 11260595 21 14799280 22 19535140 23 25686758 24 33494898 25 43070098 26 54427671 27 67357736 28 81542662 29 96447364 30 111368283 31 125487901 32 138033351 33 148206765 34 155369908 35 159087099 36 159171092 37 155622857 38 148846698 39 139259046 40 127552792 41 114430596 42 100556210 43 86651604 44 73245859 45 60749214 46 49512783 47 39647384 48 31238732 49 24234978 50 18539280 51 14016199 52 10484354 53 7783084 54 5759646 55 4260807 56 3174592 57 2403424 58 1847139 59 1455225 60 1181182 61 990561 62 854443 63 758202 64 686616 65 629569 66 584975 67 549432 68 518280 69 491088 70 468477 71 445131 72 423948 73 405274 74 385464 75 368427 76 353102 77 336391 78 320874 79 306676 80 292886 81 280401 82 269475 83 257726 84 246044 85 236982 86 227418 87 218498 88 210184 89 203767 90 197407 91 190681 92 185158 93 178775 94 173831 95 167711 96 163710 97 159727 98 154106 99 149944 100 146277 101 142097 102 138196 103 134223 104 130154 105 126480 106 122638 107 118751 108 115631 109 113106 110 109851 111 105908 112 102685 113 99933 114 96973 115 94152 116 90093 117 87803 118 85708 119 83091 120 80488 121 77705 122 75985 123 73476 124 72228 125 70376 126 68333 127 66879 128 65115 129 63729 130 61884 131 60026 132 58853 133 57178 134 55215 135 54067 136 53550 137 52317 138 50956 139 49868 140 49020 141 47870 142 46939 143 46484 144 45017 145 44504 146 43357 147 42802 148 41719 149 41075 150 39986 151 39310 152 39374 153 38521 154 37475 155 36986 156 36494 157 36049 158 35228 159 34754 160 34507 161 34226 162 33613 163 33102 164 32154 165 31894 166 31316 167 31339 168 30320 169 29748 170 29468 171 29159 172 28344 173 28360 174 27782 175 27255 176 26930 177 26728 178 26388 179 25879 180 25818 181 25423 182 24890 183 24637 184 24511 185 24251 186 23530 187 23073 188 22891 189 22755 190 22527 191 21717 192 21482 193 21519 194 21181 195 21161 196 20649 197 20352 198 20131 199 19549 200 19487 201 19298 202 19194 203 18765 204 18634 205 18166 206 18062 207 17664 208 17654 209 17211 210 17192 211 16902 212 16496 213 16468 214 16172 215 16058 216 15602 217 15590 218 15342 219 15330 220 15134 221 14970 222 14697 223 14620 224 14152 225 14107 226 13844 227 13850 228 13563 229 13431 230 13054 231 13032 232 12701 233 12688 234 12397 235 12464 236 12407 237 12032 238 11953 239 11998 240 11777 241 11845 242 11475 243 11336 244 11087 245 11183 246 10872 247 10823 248 10700 249 10462 250 1967783