#SentieonCommandLine: /lustre8/home/ykawai-tnproj-pg/packages/sentieon-genomics-201911/libexec/driver -t 8 -r /lustre8/home/ncbn-pg/data/resource/Homo_sapiens_assembly38.fasta --interval /lustre8/home/ncbn-pg/data/resource/picard-interval-list/GRCh38.chrX.interval_list -i SGDP/LP6005441-DNA_F10.hs38DH/LP6005441-DNA_F10.hs38DH.cram --algo WgsMetricsAlgo --min_map_qual 0 SGDP/LP6005441-DNA_F10.hs38DH/QCmetrics/LP6005441-DNA_F10.hs38DH.WgsMetrics.chrX.txt
GENOME_TERRITORY	MEAN_COVERAGE	SD_COVERAGE	MEDIAN_COVERAGE	MAD_COVERAGE	PCT_EXC_MAPQ	PCT_EXC_DUPE	PCT_EXC_UNPAIRED	PCT_EXC_BASEQ	PCT_EXC_OVERLAP	PCT_EXC_CAPPED	PCT_EXC_TOTAL	PCT_1X	PCT_5X	PCT_10X	PCT_15X	PCT_20X	PCT_25X	PCT_30X	PCT_40X	PCT_50X	PCT_60X	PCT_70X	PCT_80X	PCT_90X	PCT_100X	HET_SNP_SENSITIVITY	HET_SNP_Q	
152114341	32.616	8.4452	33	5	0	0.019719	0.00084758	0.07219	0.0040229	0.00014396	0.096924	0.99946	0.99828	0.99535	0.98687	0.95647	0.86164	0.6606	0.17303	0.016387	0.0033653	0.0018101	0.0011113	0.00075746	0.00055157	0.9987	29	

coverage	high_quality_coverage_count	
0	82130
1	37454
2	43181
3	45950
4	53323
5	61803
6	73014
7	85445
8	101700
9	123294
10	153769
11	189927
12	239782
13	308491
14	397506
15	516260
16	671099
17	871098
18	1125254
19	1441370
20	1826688
21	2285890
22	2820413
23	3419182
24	4071997
25	4766340
26	5473325
27	6170146
28	6807242
29	7363809
30	7814033
31	8133764
32	8288170
33	8281725
34	8111588
35	7787721
36	7336335
37	6781048
38	6153544
39	5478521
40	4788607
41	4122051
42	3476507
43	2888845
44	2362973
45	1899904
46	1508636
47	1177807
48	909512
49	693456
50	525792
51	394770
52	293603
53	217425
54	162153
55	121712
56	92011
57	71023
58	56081
59	46238
60	38368
61	32783
62	28688
63	25282
64	22831
65	20611
66	18832
67	17750
68	16221
69	15189
70	14217
71	13198
72	12122
73	11741
74	10827
75	10261
76	9685
77	8673
78	8001
79	7584
80	7010
81	6512
82	6377
83	5778
84	5466
85	5027
86	4759
87	4489
88	4309
89	4092
90	4028
91	3552
92	3511
93	3435
94	3117
95	3004
96	2913
97	2749
98	2617
99	2393
100	2356
101	2185
102	2052
103	1937
104	1932
105	1793
106	1697
107	1607
108	1556
109	1504
110	1407
111	1423
112	1312
113	1310
114	1321
115	1254
116	1207
117	1181
118	1090
119	1062
120	1055
121	1074
122	983
123	975
124	943
125	877
126	887
127	852
128	845
129	722
130	747
131	774
132	743
133	707
134	708
135	684
136	637
137	631
138	627
139	604
140	582
141	568
142	562
143	554
144	491
145	503
146	525
147	523
148	522
149	493
150	538
151	528
152	470
153	477
154	457
155	440
156	399
157	451
158	431
159	422
160	398
161	401
162	373
163	404
164	405
165	346
166	353
167	350
168	346
169	330
170	365
171	333
172	319
173	332
174	321
175	315
176	319
177	331
178	303
179	308
180	274
181	268
182	243
183	259
184	312
185	271
186	243
187	251
188	240
189	229
190	220
191	250
192	258
193	234
194	215
195	210
196	223
197	235
198	220
199	201
200	214
201	207
202	201
203	202
204	199
205	168
206	205
207	191
208	181
209	167
210	184
211	206
212	154
213	168
214	161
215	152
216	134
217	137
218	154
219	114
220	108
221	135
222	135
223	108
224	118
225	123
226	120
227	111
228	102
229	106
230	110
231	111
232	100
233	104
234	90
235	93
236	89
237	99
238	129
239	92
240	88
241	89
242	96
243	88
244	75
245	105
246	82
247	76
248	94
249	95
250	8327