#SentieonCommandLine: /lustre8/home/ykawai-tnproj-pg/packages/sentieon-genomics-201911/libexec/driver -t 8 -r /lustre8/home/ncbn-pg/data/resource/Homo_sapiens_assembly38.fasta --interval /lustre8/home/ncbn-pg/data/resource/picard-interval-list/GRCh38.chrY.interval_list -i SGDP/LP6005441-DNA_F10.hs38DH/LP6005441-DNA_F10.hs38DH.cram --algo WgsMetricsAlgo --min_map_qual 0 SGDP/LP6005441-DNA_F10.hs38DH/QCmetrics/LP6005441-DNA_F10.hs38DH.WgsMetrics.chrY.txt
GENOME_TERRITORY	MEAN_COVERAGE	SD_COVERAGE	MEDIAN_COVERAGE	MAD_COVERAGE	PCT_EXC_MAPQ	PCT_EXC_DUPE	PCT_EXC_UNPAIRED	PCT_EXC_BASEQ	PCT_EXC_OVERLAP	PCT_EXC_CAPPED	PCT_EXC_TOTAL	PCT_1X	PCT_5X	PCT_10X	PCT_15X	PCT_20X	PCT_25X	PCT_30X	PCT_40X	PCT_50X	PCT_60X	PCT_70X	PCT_80X	PCT_90X	PCT_100X	HET_SNP_SENSITIVITY	HET_SNP_Q	
23636355	2.3018	16.797	0	0	0	0.064595	0.0044105	0.068485	0.025049	0.39468	0.55722	0.14218	0.06226	0.034139	0.023513	0.018705	0.015887	0.014048	0.01166	0.010203	0.0091605	0.008346	0.0075881	0.0069699	0.0064499	0.098791	0	

coverage	high_quality_coverage_count	
0	20275853
1	833947
2	474578
3	329252
4	251123
5	197029
6	156309
7	126390
8	102389
9	82559
10	68801
11	58238
12	48253
13	41138
14	34724
15	29830
16	25241
17	22243
18	19083
19	17251
20	15797
21	14347
22	12944
23	12281
24	11241
25	10064
26	9242
27	8615
28	8097
29	7451
30	7050
31	6657
32	6334
33	6268
34	5828
35	5535
36	5161
37	4919
38	4416
39	4282
40	4019
41	3870
42	3858
43	3498
44	3485
45	3543
46	3384
47	3020
48	2930
49	2818
50	2831
51	2698
52	2526
53	2525
54	2483
55	2542
56	2365
57	2214
58	2210
59	2254
60	2183
61	2081
62	1938
63	2053
64	1899
65	1806
66	1806
67	1800
68	1861
69	1826
70	1814
71	1878
72	1828
73	1843
74	1804
75	1832
76	1770
77	1781
78	1700
79	1665
80	1636
81	1540
82	1533
83	1474
84	1419
85	1431
86	1393
87	1432
88	1363
89	1389
90	1324
91	1345
92	1301
93	1292
94	1191
95	1224
96	1204
97	1202
98	1099
99	1111
100	1121
101	1150
102	1123
103	1084
104	1120
105	1098
106	1113
107	1032
108	1124
109	1118
110	1074
111	1090
112	1114
113	1091
114	1087
115	1125
116	1133
117	1146
118	1067
119	1139
120	1061
121	1041
122	1077
123	1062
124	1071
125	1023
126	993
127	1090
128	1043
129	998
130	1066
131	1024
132	1034
133	967
134	1004
135	882
136	935
137	918
138	887
139	903
140	869
141	844
142	842
143	836
144	906
145	826
146	763
147	806
148	763
149	801
150	778
151	737
152	767
153	801
154	750
155	735
156	732
157	700
158	779
159	697
160	703
161	730
162	717
163	695
164	677
165	669
166	668
167	654
168	669
169	621
170	621
171	588
172	584
173	540
174	565
175	548
176	550
177	533
178	526
179	540
180	498
181	532
182	516
183	524
184	473
185	462
186	474
187	465
188	472
189	433
190	444
191	437
192	438
193	384
194	430
195	369
196	374
197	397
198	372
199	379
200	331
201	371
202	351
203	321
204	327
205	321
206	316
207	314
208	347
209	329
210	280
211	302
212	300
213	286
214	282
215	290
216	287
217	276
218	286
219	268
220	267
221	322
222	281
223	275
224	260
225	259
226	269
227	279
228	284
229	276
230	295
231	252
232	227
233	242
234	246
235	286
236	245
237	222
238	252
239	251
240	226
241	243
242	236
243	220
244	224
245	212
246	196
247	200
248	210
249	218
250	59560