#SentieonCommandLine: /lustre8/home/ykawai-tnproj-pg/packages/sentieon-genomics-201911/libexec/driver -t 8 -r /lustre8/home/ncbn-pg/data/resource/Homo_sapiens_assembly38.fasta --interval /lustre8/home/ncbn-pg/data/resource/picard-interval-list/GRCh38.chrX.interval_list -i SGDP/LP6005441-DNA_F12.hs38DH/LP6005441-DNA_F12.hs38DH.cram --algo WgsMetricsAlgo --min_map_qual 0 SGDP/LP6005441-DNA_F12.hs38DH/QCmetrics/LP6005441-DNA_F12.hs38DH.WgsMetrics.chrX.txt
GENOME_TERRITORY	MEAN_COVERAGE	SD_COVERAGE	MEDIAN_COVERAGE	MAD_COVERAGE	PCT_EXC_MAPQ	PCT_EXC_DUPE	PCT_EXC_UNPAIRED	PCT_EXC_BASEQ	PCT_EXC_OVERLAP	PCT_EXC_CAPPED	PCT_EXC_TOTAL	PCT_1X	PCT_5X	PCT_10X	PCT_15X	PCT_20X	PCT_25X	PCT_30X	PCT_40X	PCT_50X	PCT_60X	PCT_70X	PCT_80X	PCT_90X	PCT_100X	HET_SNP_SENSITIVITY	HET_SNP_Q	
152114341	33.974	8.1985	34	5	0	0.019843	0.0026262	0.07049	0.0041742	5.7368e-05	0.097191	0.99969	0.99868	0.99609	0.98955	0.96926	0.90181	0.73246	0.21968	0.021005	0.0034226	0.0017554	0.0010441	0.00067338	0.00047038	0.99907	30	

coverage	high_quality_coverage_count	
0	46947
1	31043
2	34685
3	41545
4	47108
5	55922
6	66005
7	76199
8	89391
9	106624
10	127394
11	156468
12	189719
13	233048
14	288091
15	360729
16	454266
17	578059
18	741714
19	950714
20	1217641
21	1559436
22	1972142
23	2468374
24	3043195
25	3696379
26	4407454
27	5148489
28	5896328
29	6611376
30	7261781
31	7801032
32	8204716
33	8445923
34	8506701
35	8386364
36	8107461
37	7675450
38	7121467
39	6490446
40	5791074
41	5073337
42	4365257
43	3682054
44	3055735
45	2493239
46	2001249
47	1581524
48	1231056
49	946831
50	718347
51	539619
52	401965
53	296601
54	218873
55	162482
56	121051
57	90618
58	69730
59	55246
60	44091
61	36082
62	30816
63	26896
64	23778
65	21453
66	19695
67	18286
68	16811
69	15692
70	14689
71	13427
72	12633
73	11755
74	10867
75	10201
76	9565
77	9081
78	8269
79	7722
80	7319
81	6867
82	6531
83	6159
84	5687
85	5336
86	4972
87	4704
88	4631
89	4182
90	4024
91	3659
92	3467
93	3261
94	2993
95	2985
96	2815
97	2718
98	2561
99	2395
100	2312
101	2162
102	2109
103	1967
104	1820
105	1736
106	1686
107	1636
108	1568
109	1460
110	1301
111	1280
112	1221
113	1153
114	1166
115	1118
116	1058
117	1067
118	1047
119	1001
120	1043
121	966
122	926
123	905
124	844
125	867
126	829
127	785
128	769
129	719
130	724
131	732
132	666
133	617
134	633
135	595
136	556
137	575
138	543
139	491
140	516
141	511
142	439
143	469
144	490
145	460
146	419
147	466
148	466
149	456
150	429
151	376
152	389
153	371
154	339
155	324
156	344
157	330
158	312
159	305
160	314
161	296
162	292
163	264
164	273
165	274
166	269
167	252
168	266
169	234
170	266
171	250
172	224
173	217
174	242
175	231
176	229
177	208
178	206
179	217
180	214
181	189
182	228
183	195
184	172
185	221
186	198
187	205
188	215
189	200
190	166
191	188
192	189
193	165
194	182
195	170
196	162
197	168
198	167
199	131
200	159
201	153
202	169
203	140
204	148
205	139
206	139
207	151
208	119
209	129
210	134
211	134
212	148
213	116
214	111
215	124
216	129
217	96
218	125
219	99
220	91
221	101
222	93
223	95
224	87
225	75
226	118
227	101
228	81
229	106
230	80
231	96
232	86
233	100
234	96
235	85
236	96
237	81
238	88
239	72
240	71
241	84
242	68
243	82
244	62
245	67
246	73
247	89
248	64
249	59
250	4730