#SentieonCommandLine: /lustre8/home/ykawai-tnproj-pg/packages/sentieon-genomics-201911/libexec/driver -t 8 -r /lustre8/home/ncbn-pg/data/resource/Homo_sapiens_assembly38.fasta --interval /lustre8/home/ncbn-pg/data/resource/picard-interval-list/GRCh38.chrX.interval_list -i SGDP/LP6005441-DNA_H02.hs38DH/LP6005441-DNA_H02.hs38DH.cram --algo WgsMetricsAlgo --min_map_qual 0 SGDP/LP6005441-DNA_H02.hs38DH/QCmetrics/LP6005441-DNA_H02.hs38DH.WgsMetrics.chrX.txt GENOME_TERRITORY MEAN_COVERAGE SD_COVERAGE MEDIAN_COVERAGE MAD_COVERAGE PCT_EXC_MAPQ PCT_EXC_DUPE PCT_EXC_UNPAIRED PCT_EXC_BASEQ PCT_EXC_OVERLAP PCT_EXC_CAPPED PCT_EXC_TOTAL PCT_1X PCT_5X PCT_10X PCT_15X PCT_20X PCT_25X PCT_30X PCT_40X PCT_50X PCT_60X PCT_70X PCT_80X PCT_90X PCT_100X HET_SNP_SENSITIVITY HET_SNP_Q 152114341 20.133 6.11 20 3 0 0.011563 0.0019071 0.038497 0.0078988 0.0001531 0.060019 0.99622 0.98558 0.96931 0.86924 0.54627 0.19353 0.04093 0.0039653 0.0015489 0.00079759 0.00049484 0.00034774 0.00026328 0.00020136 0.98992 20 coverage high_quality_coverage_count 0 575565 1 441544 2 415709 3 389438 4 371863 5 355240 6 364693 7 417247 8 544751 9 792403 10 1207214 11 1848720 12 2767539 13 3972917 14 5426117 15 7032026 16 8655325 17 10132022 18 11297972 19 12010250 20 12204782 21 11869367 22 11073517 23 9936452 24 8573354 25 7135804 26 5746733 27 4474714 28 3377462 29 2477546 30 1776501 31 1244494 32 854663 33 581414 34 395946 35 270357 36 186586 37 134024 38 100615 39 78283 40 63364 41 53878 42 46793 43 40975 44 35460 45 31895 46 28014 47 25024 48 22113 49 20046 50 17576 51 16109 52 14152 53 12438 54 11498 55 10239 56 9294 57 8414 58 7547 59 7018 60 6404 61 5877 62 5316 63 5035 64 4518 65 4447 66 4103 67 3729 68 3491 69 3133 70 2943 71 2732 72 2631 73 2427 74 2352 75 2040 76 1966 77 1854 78 1724 79 1707 80 1688 81 1576 82 1553 83 1390 84 1365 85 1182 86 1110 87 1063 88 981 89 940 90 1028 91 1008 92 1008 93 1001 94 1007 95 895 96 905 97 900 98 878 99 789 100 705 101 732 102 689 103 702 104 632 105 664 106 620 107 606 108 575 109 567 110 523 111 596 112 572 113 593 114 581 115 526 116 539 117 482 118 487 119 444 120 458 121 458 122 451 123 420 124 385 125 400 126 391 127 363 128 405 129 384 130 334 131 346 132 345 133 341 134 346 135 302 136 313 137 315 138 329 139 282 140 324 141 301 142 306 143 283 144 262 145 245 146 229 147 225 148 226 149 222 150 222 151 187 152 181 153 153 154 164 155 128 156 137 157 154 158 165 159 152 160 154 161 152 162 144 163 109 164 120 165 96 166 111 167 93 168 94 169 93 170 89 171 93 172 84 173 80 174 76 175 75 176 69 177 72 178 84 179 85 180 83 181 66 182 80 183 92 184 76 185 88 186 54 187 56 188 71 189 45 190 62 191 63 192 62 193 68 194 58 195 57 196 45 197 45 198 38 199 38 200 40 201 41 202 49 203 52 204 37 205 46 206 42 207 41 208 50 209 39 210 37 211 45 212 33 213 28 214 40 215 32 216 32 217 36 218 30 219 25 220 33 221 36 222 24 223 34 224 26 225 37 226 25 227 36 228 22 229 23 230 27 231 24 232 23 233 34 234 29 235 44 236 41 237 28 238 31 239 27 240 37 241 32 242 40 243 33 244 27 245 36 246 27 247 17 248 19 249 16 250 2277