#SentieonCommandLine: /lustre8/home/ykawai-tnproj-pg/packages/sentieon-genomics-201911/libexec/driver -t 8 -r /lustre8/home/ncbn-pg/data/resource/Homo_sapiens_assembly38.fasta --interval /lustre8/home/ncbn-pg/data/resource/picard-interval-list/GRCh38.chrX.interval_list -i SGDP/LP6005442-DNA_D02.hs38DH/LP6005442-DNA_D02.hs38DH.cram --algo WgsMetricsAlgo --min_map_qual 0 SGDP/LP6005442-DNA_D02.hs38DH/QCmetrics/LP6005442-DNA_D02.hs38DH.WgsMetrics.chrX.txt
GENOME_TERRITORY	MEAN_COVERAGE	SD_COVERAGE	MEDIAN_COVERAGE	MAD_COVERAGE	PCT_EXC_MAPQ	PCT_EXC_DUPE	PCT_EXC_UNPAIRED	PCT_EXC_BASEQ	PCT_EXC_OVERLAP	PCT_EXC_CAPPED	PCT_EXC_TOTAL	PCT_1X	PCT_5X	PCT_10X	PCT_15X	PCT_20X	PCT_25X	PCT_30X	PCT_40X	PCT_50X	PCT_60X	PCT_70X	PCT_80X	PCT_90X	PCT_100X	HET_SNP_SENSITIVITY	HET_SNP_Q	
152114341	18.126	5.3096	18	3	0	0.013004	0.0047132	0.042877	0.0052177	0.00022751	0.06604	0.99703	0.98959	0.96194	0.77935	0.37818	0.094167	0.014704	0.0014287	0.00049812	0.00027172	0.0001879	0.00014171	0.00010869	8.5817e-05	0.9912	21	

coverage	high_quality_coverage_count	
0	451099
1	288809
2	267801
3	274145
4	302282
5	359329
6	466342
7	672917
8	1052191
9	1654013
10	2552221
11	3795211
12	5341592
13	7121092
14	8964737
15	10656714
16	12004785
17	12812563
18	12994185
19	12556126
20	11596946
21	10244923
22	8692157
23	7092573
24	5575432
25	4224974
26	3106037
27	2204419
28	1523720
29	1028380
30	682983
31	446981
32	291482
33	193184
34	129202
35	90042
36	65096
37	49660
38	39136
39	31537
40	26623
41	22142
42	18524
43	15822
44	13520
45	11805
46	10449
47	8631
48	7472
49	6564
50	5716
51	4833
52	4401
53	3923
54	3397
55	3071
56	2682
57	2403
58	2124
59	1888
60	1631
61	1554
62	1492
63	1484
64	1328
65	1160
66	1072
67	1039
68	1055
69	936
70	913
71	851
72	763
73	762
74	700
75	622
76	627
77	648
78	587
79	553
80	552
81	530
82	533
83	494
84	490
85	472
86	494
87	484
88	487
89	486
90	444
91	452
92	398
93	357
94	354
95	321
96	333
97	286
98	272
99	263
100	271
101	277
102	261
103	263
104	235
105	234
106	267
107	249
108	202
109	245
110	233
111	244
112	219
113	217
114	209
115	195
116	192
117	177
118	179
119	169
120	136
121	138
122	163
123	141
124	130
125	125
126	145
127	148
128	135
129	148
130	143
131	104
132	133
133	136
134	153
135	119
136	161
137	139
138	156
139	135
140	120
141	143
142	122
143	120
144	132
145	106
146	114
147	87
148	115
149	119
150	94
151	75
152	85
153	86
154	64
155	77
156	91
157	54
158	89
159	61
160	73
161	83
162	84
163	69
164	74
165	80
166	56
167	70
168	62
169	65
170	86
171	72
172	56
173	61
174	41
175	48
176	50
177	40
178	46
179	40
180	26
181	32
182	30
183	30
184	34
185	28
186	39
187	32
188	32
189	35
190	37
191	38
192	42
193	38
194	37
195	38
196	30
197	40
198	32
199	32
200	18
201	21
202	14
203	12
204	25
205	22
206	12
207	12
208	11
209	16
210	12
211	11
212	19
213	13
214	15
215	8
216	9
217	18
218	17
219	10
220	12
221	10
222	13
223	11
224	11
225	13
226	13
227	5
228	8
229	7
230	11
231	12
232	12
233	13
234	16
235	18
236	15
237	19
238	9
239	15
240	13
241	16
242	13
243	15
244	20
245	16
246	23
247	21
248	15
249	26
250	1120