#SentieonCommandLine: /lustre8/home/ykawai-tnproj-pg/packages/sentieon-genomics-201911/libexec/driver -t 8 -r /lustre8/home/ncbn-pg/data/resource/Homo_sapiens_assembly38.fasta --interval /lustre8/home/ncbn-pg/data/resource/picard-interval-list/GRCh38.chrX.interval_list -i SGDP/LP6005442-DNA_E10.hs38DH/LP6005442-DNA_E10.hs38DH.cram --algo WgsMetricsAlgo --min_map_qual 0 SGDP/LP6005442-DNA_E10.hs38DH/QCmetrics/LP6005442-DNA_E10.hs38DH.WgsMetrics.chrX.txt GENOME_TERRITORY MEAN_COVERAGE SD_COVERAGE MEDIAN_COVERAGE MAD_COVERAGE PCT_EXC_MAPQ PCT_EXC_DUPE PCT_EXC_UNPAIRED PCT_EXC_BASEQ PCT_EXC_OVERLAP PCT_EXC_CAPPED PCT_EXC_TOTAL PCT_1X PCT_5X PCT_10X PCT_15X PCT_20X PCT_25X PCT_30X PCT_40X PCT_50X PCT_60X PCT_70X PCT_80X PCT_90X PCT_100X HET_SNP_SENSITIVITY HET_SNP_Q 152114341 19.227 5.8382 19 3 0 0.0092316 0.0014548 0.049352 0.002875 0.00023601 0.063149 0.99869 0.99377 0.96997 0.82596 0.46609 0.14565 0.027526 0.0023077 0.0010538 0.0006633 0.00047216 0.00034895 0.00026184 0.00020488 0.9944 23 coverage high_quality_coverage_count 0 199186 1 133293 2 164302 3 199106 4 251555 5 324117 6 436409 7 614516 8 895982 9 1349981 10 2010432 11 2950043 12 4157197 13 5603879 14 7183948 15 8781079 16 10236300 17 11380723 18 12083900 19 12259930 20 11913046 21 11111001 22 9949092 23 8596948 24 7173123 25 5776009 26 4503452 27 3404021 28 2498292 29 1786363 30 1252500 31 861743 32 584179 33 389260 34 261082 35 174175 36 120638 37 84959 38 61373 39 46171 40 36561 41 29534 42 24548 43 21040 44 17787 45 15794 46 13350 47 11885 48 10530 49 9707 50 8701 51 7907 52 7143 53 6396 54 5996 55 5258 56 5196 57 4605 58 4334 59 3867 60 3755 61 3476 62 3277 63 3081 64 2899 65 2718 66 2577 67 2545 68 2427 69 2319 70 2236 71 2075 72 2002 73 2008 74 1881 75 1880 76 1715 77 1701 78 1629 79 1615 80 1553 81 1560 82 1511 83 1386 84 1343 85 1275 86 1160 87 1227 88 1083 89 1153 90 1032 91 1003 92 915 93 881 94 860 95 824 96 820 97 787 98 762 99 781 100 755 101 683 102 697 103 623 104 568 105 579 106 540 107 574 108 514 109 512 110 497 111 493 112 453 113 412 114 423 115 397 116 343 117 372 118 342 119 325 120 330 121 301 122 326 123 273 124 239 125 255 126 269 127 271 128 262 129 267 130 287 131 250 132 307 133 264 134 237 135 262 136 228 137 206 138 223 139 212 140 206 141 180 142 205 143 198 144 215 145 189 146 202 147 233 148 229 149 194 150 208 151 185 152 166 153 173 154 183 155 173 156 175 157 185 158 173 159 179 160 198 161 154 162 145 163 162 164 144 165 138 166 152 167 157 168 126 169 136 170 153 171 154 172 161 173 154 174 151 175 157 176 136 177 122 178 112 179 127 180 105 181 96 182 131 183 107 184 108 185 100 186 103 187 111 188 105 189 102 190 102 191 110 192 94 193 87 194 101 195 91 196 86 197 74 198 63 199 83 200 76 201 67 202 70 203 60 204 80 205 59 206 69 207 84 208 73 209 70 210 77 211 91 212 75 213 89 214 82 215 98 216 75 217 84 218 82 219 80 220 79 221 77 222 71 223 71 224 55 225 69 226 72 227 57 228 72 229 63 230 45 231 56 232 47 233 57 234 44 235 36 236 40 237 56 238 48 239 39 240 42 241 36 242 51 243 45 244 37 245 38 246 35 247 38 248 31 249 38 250 3959