#SentieonCommandLine: /lustre8/home/ykawai-tnproj-pg/packages/sentieon-genomics-201911/libexec/driver -t 8 -r /lustre8/home/ncbn-pg/data/resource/Homo_sapiens_assembly38.fasta --interval /lustre8/home/ncbn-pg/data/resource/picard-interval-list/GRCh38.chrY.interval_list -i SGDP/LP6005442-DNA_E10.hs38DH/LP6005442-DNA_E10.hs38DH.cram --algo WgsMetricsAlgo --min_map_qual 0 SGDP/LP6005442-DNA_E10.hs38DH/QCmetrics/LP6005442-DNA_E10.hs38DH.WgsMetrics.chrY.txt GENOME_TERRITORY MEAN_COVERAGE SD_COVERAGE MEDIAN_COVERAGE MAD_COVERAGE PCT_EXC_MAPQ PCT_EXC_DUPE PCT_EXC_UNPAIRED PCT_EXC_BASEQ PCT_EXC_OVERLAP PCT_EXC_CAPPED PCT_EXC_TOTAL PCT_1X PCT_5X PCT_10X PCT_15X PCT_20X PCT_25X PCT_30X PCT_40X PCT_50X PCT_60X PCT_70X PCT_80X PCT_90X PCT_100X HET_SNP_SENSITIVITY HET_SNP_Q 23636355 22.899 24.796 19 3 0 0.04441 0.0012256 0.043399 0.0060856 0.31032 0.40544 0.99953 0.99769 0.97931 0.83941 0.48604 0.17938 0.066622 0.035148 0.027504 0.022757 0.019442 0.017062 0.015468 0.014461 0.99688 25 coverage high_quality_coverage_count 0 11217 1 6556 2 8314 3 11708 4 16747 5 25522 6 41743 7 68426 8 113659 9 185028 10 291612 11 437519 12 627067 13 849862 14 1100733 15 1353000 16 1574431 17 1740083 18 1835229 19 1849764 20 1785729 21 1659542 22 1480579 23 1269061 24 1053226 25 850440 26 662820 27 502545 28 375827 29 273656 30 199034 31 143508 32 103150 33 75288 34 56787 35 44462 36 36992 37 31531 38 27763 39 25416 40 23260 41 21832 42 20387 43 18793 44 17855 45 17328 46 16415 47 15901 48 14774 49 14133 50 13471 51 12940 52 12550 53 11833 54 11327 55 10927 56 10261 57 10106 58 9630 59 9157 60 8888 61 8718 62 8439 63 8111 64 7906 65 7562 66 7607 67 7355 68 7032 69 6752 70 6600 71 6404 72 6142 73 6032 74 5641 75 5448 76 5134 77 5054 78 4940 79 4841 80 4723 81 4531 82 4237 83 3970 84 3763 85 3568 86 3444 87 3246 88 3197 89 3012 90 2793 91 2633 92 2563 93 2545 94 2365 95 2324 96 2208 97 2113 98 2119 99 2132 100 1907 101 2006 102 1862 103 1881 104 1759 105 1827 106 1666 107 1642 108 1585 109 1557 110 1567 111 1524 112 1381 113 1490 114 1420 115 1364 116 1381 117 1417 118 1397 119 1317 120 1375 121 1396 122 1324 123 1356 124 1245 125 1315 126 1265 127 1244 128 1276 129 1238 130 1254 131 1219 132 1237 133 1261 134 1252 135 1273 136 1211 137 1197 138 1193 139 1213 140 1195 141 1275 142 1210 143 1229 144 1223 145 1201 146 1252 147 1288 148 1297 149 1258 150 1282 151 1207 152 1257 153 1226 154 1299 155 1257 156 1252 157 1230 158 1236 159 1251 160 1187 161 1222 162 1164 163 1189 164 1184 165 1139 166 1133 167 1123 168 1134 169 1080 170 999 171 1063 172 1072 173 1001 174 1023 175 988 176 1036 177 1016 178 1034 179 1032 180 980 181 1038 182 972 183 920 184 906 185 888 186 930 187 899 188 881 189 855 190 920 191 835 192 765 193 822 194 769 195 776 196 789 197 728 198 819 199 754 200 793 201 767 202 792 203 814 204 724 205 786 206 763 207 797 208 718 209 695 210 765 211 739 212 717 213 690 214 637 215 635 216 586 217 638 218 598 219 626 220 634 221 618 222 574 223 572 224 590 225 570 226 614 227 601 228 598 229 555 230 565 231 565 232 578 233 514 234 524 235 540 236 507 237 498 238 541 239 489 240 479 241 469 242 456 243 461 244 445 245 442 246 446 247 368 248 487 249 422 250 190521