#SentieonCommandLine: /lustre8/home/ykawai-tnproj-pg/packages/sentieon-genomics-201911/libexec/driver -t 8 -r /lustre8/home/ncbn-pg/data/resource/Homo_sapiens_assembly38.fasta --interval /lustre8/home/ncbn-pg/data/resource/picard-interval-list/GRCh38.chrX.interval_list -i SGDP/LP6005442-DNA_F04.hs38DH/LP6005442-DNA_F04.hs38DH.cram --algo WgsMetricsAlgo --min_map_qual 0 SGDP/LP6005442-DNA_F04.hs38DH/QCmetrics/LP6005442-DNA_F04.hs38DH.WgsMetrics.chrX.txt GENOME_TERRITORY MEAN_COVERAGE SD_COVERAGE MEDIAN_COVERAGE MAD_COVERAGE PCT_EXC_MAPQ PCT_EXC_DUPE PCT_EXC_UNPAIRED PCT_EXC_BASEQ PCT_EXC_OVERLAP PCT_EXC_CAPPED PCT_EXC_TOTAL PCT_1X PCT_5X PCT_10X PCT_15X PCT_20X PCT_25X PCT_30X PCT_40X PCT_50X PCT_60X PCT_70X PCT_80X PCT_90X PCT_100X HET_SNP_SENSITIVITY HET_SNP_Q 152114341 17.766 5.445 18 3 0 0.011344 0.0014405 0.032236 0.0038965 0.00019062 0.049107 0.99884 0.99353 0.95756 0.74591 0.34485 0.085115 0.014669 0.0018966 0.00074792 0.0004597 0.00033567 0.00025644 0.00019906 0.00015356 0.99361 22 coverage high_quality_coverage_count 0 176698 1 137916 2 169617 3 216130 4 283446 5 396102 6 580756 7 900431 8 1411058 9 2183180 10 3270117 11 4670017 12 6326222 13 8101149 14 9827558 15 11300622 16 12323493 17 12788814 18 12638712 19 11956357 20 10842171 21 9436480 22 7894626 23 6371878 24 4963619 25 3745714 26 2740532 27 1951491 28 1354557 29 923466 30 623010 31 417615 32 278958 33 188351 34 131504 35 94087 36 71016 37 55208 38 44929 39 38234 40 32502 41 27663 42 23053 43 19804 44 16929 45 14416 46 12404 47 10826 48 9247 49 7887 50 6862 51 6153 52 5332 53 4668 54 4298 55 3843 56 3596 57 3162 58 3065 59 2863 60 2519 61 2414 62 2098 63 1962 64 1808 65 1815 66 1764 67 1572 68 1489 69 1426 70 1431 71 1378 72 1343 73 1273 74 1281 75 1146 76 1072 77 1058 78 1037 79 1033 80 986 81 989 82 920 83 896 84 866 85 883 86 846 87 808 88 762 89 772 90 781 91 780 92 741 93 710 94 686 95 698 96 649 97 636 98 606 99 634 100 556 101 621 102 545 103 524 104 481 105 474 106 452 107 384 108 395 109 393 110 419 111 441 112 413 113 424 114 407 115 412 116 418 117 383 118 394 119 356 120 342 121 326 122 355 123 278 124 284 125 291 126 269 127 253 128 218 129 262 130 226 131 220 132 194 133 206 134 228 135 208 136 175 137 186 138 199 139 185 140 184 141 159 142 151 143 145 144 185 145 178 146 180 147 166 148 202 149 166 150 160 151 133 152 146 153 124 154 134 155 143 156 137 157 118 158 127 159 110 160 124 161 114 162 140 163 116 164 99 165 113 166 108 167 107 168 113 169 111 170 110 171 107 172 99 173 109 174 89 175 98 176 95 177 85 178 99 179 72 180 92 181 85 182 85 183 74 184 78 185 67 186 64 187 87 188 53 189 66 190 78 191 79 192 52 193 70 194 57 195 62 196 58 197 42 198 64 199 54 200 48 201 48 202 54 203 58 204 52 205 77 206 51 207 59 208 54 209 40 210 53 211 48 212 42 213 39 214 44 215 41 216 42 217 31 218 23 219 38 220 32 221 24 222 26 223 28 224 29 225 23 226 16 227 22 228 22 229 16 230 23 231 29 232 13 233 18 234 18 235 19 236 23 237 22 238 20 239 22 240 15 241 19 242 16 243 18 244 23 245 22 246 12 247 29 248 24 249 15 250 1459