#SentieonCommandLine: /lustre8/home/ykawai-tnproj-pg/packages/sentieon-genomics-201911/libexec/driver -t 8 -r /lustre8/home/ncbn-pg/data/resource/Homo_sapiens_assembly38.fasta --interval /lustre8/home/ncbn-pg/data/resource/picard-interval-list/GRCh38.autosome-PAR.interval_list -i SGDP/LP6005442-DNA_G10.hs38DH/LP6005442-DNA_G10.hs38DH.cram --algo WgsMetricsAlgo --min_map_qual 0 SGDP/LP6005442-DNA_G10.hs38DH/QCmetrics/LP6005442-DNA_G10.hs38DH.WgsMetrics.autosome.txt GENOME_TERRITORY MEAN_COVERAGE SD_COVERAGE MEDIAN_COVERAGE MAD_COVERAGE PCT_EXC_MAPQ PCT_EXC_DUPE PCT_EXC_UNPAIRED PCT_EXC_BASEQ PCT_EXC_OVERLAP PCT_EXC_CAPPED PCT_EXC_TOTAL PCT_1X PCT_5X PCT_10X PCT_15X PCT_20X PCT_25X PCT_30X PCT_40X PCT_50X PCT_60X PCT_70X PCT_80X PCT_90X PCT_100X HET_SNP_SENSITIVITY HET_SNP_Q 2747965384 37.583 11.71 37 5 0 0.019196 0.0021681 0.053378 0.004581 0.012778 0.0921 0.99871 0.9964 0.99351 0.98881 0.97773 0.94434 0.84578 0.38215 0.06072 0.010762 0.0066641 0.0050447 0.0039391 0.0031695 0.99747 26 coverage high_quality_coverage_count 0 3533502 1 1820465 2 1575472 3 1484031 4 1468929 5 1469491 6 1499657 7 1559028 8 1647832 9 1783806 10 1958285 11 2194069 12 2492149 13 2888071 14 3379486 15 4005126 16 4801030 17 5801197 18 7087085 19 8751157 20 10915622 21 13723244 22 17353742 23 21988030 24 27781737 25 34859186 26 43282578 27 53026942 28 63934358 29 75731876 30 88054237 31 100496030 32 112461245 33 123329353 34 132594277 35 139719827 36 144361119 37 146220863 38 145261930 39 141545592 40 135316885 41 127005234 42 117050485 43 105936762 44 94225672 45 82374209 46 70798578 47 59863689 48 49834678 49 40862047 50 32988845 51 26274615 52 20657715 53 16044627 54 12327302 55 9394474 56 7114786 57 5363455 58 4045459 59 3069836 60 2349279 61 1826252 62 1450185 63 1181234 64 988265 65 848563 66 749222 67 675344 68 618652 69 574743 70 541882 71 512552 72 487989 73 466951 74 446335 75 428767 76 413962 77 399072 78 383498 79 368835 80 355901 81 343004 82 330966 83 319785 84 307573 85 297630 86 286009 87 275288 88 266222 89 255982 90 246976 91 238010 92 230001 93 222235 94 213634 95 207022 96 199100 97 192595 98 186218 99 179097 100 172651 101 167211 102 159710 103 154999 104 149545 105 144467 106 140324 107 135258 108 130874 109 127045 110 122604 111 118329 112 114900 113 110527 114 107878 115 103853 116 101140 117 98351 118 95241 119 92744 120 90062 121 87438 122 85069 123 82353 124 79825 125 77375 126 75820 127 73744 128 71315 129 70094 130 68108 131 66792 132 64960 133 63361 134 61937 135 60514 136 59178 137 58143 138 56940 139 56271 140 54301 141 52892 142 51895 143 50833 144 50067 145 49271 146 48460 147 47495 148 46926 149 46008 150 45156 151 44158 152 43499 153 42700 154 42141 155 41379 156 41058 157 40766 158 39431 159 39347 160 38326 161 38230 162 36854 163 36719 164 36196 165 35426 166 34819 167 34434 168 34090 169 33031 170 33194 171 32675 172 32152 173 31915 174 31331 175 30821 176 30274 177 30015 178 29217 179 28757 180 28340 181 27822 182 27197 183 27216 184 26499 185 26218 186 26055 187 25104 188 24805 189 24261 190 24218 191 23659 192 23405 193 23337 194 22683 195 22181 196 21921 197 21529 198 21368 199 21059 200 20496 201 20227 202 20002 203 19894 204 19690 205 18946 206 18991 207 18645 208 18572 209 18306 210 18015 211 17427 212 17349 213 16949 214 16858 215 16575 216 16306 217 16083 218 15670 219 15716 220 15369 221 15239 222 15056 223 14782 224 14474 225 14027 226 14133 227 14049 228 13984 229 13518 230 13490 231 13217 232 13182 233 12888 234 12801 235 12540 236 12401 237 12232 238 12454 239 12250 240 12288 241 12025 242 11725 243 11689 244 11623 245 11394 246 11197 247 11160 248 10965 249 10863 250 1929727