#SentieonCommandLine: /lustre8/home/ykawai-tnproj-pg/packages/sentieon-genomics-201911/libexec/driver -t 8 -r /lustre8/home/ncbn-pg/data/resource/Homo_sapiens_assembly38.fasta --interval /lustre8/home/ncbn-pg/data/resource/picard-interval-list/GRCh38.chrY.interval_list -i SGDP/LP6005442-DNA_G10.hs38DH/LP6005442-DNA_G10.hs38DH.cram --algo WgsMetricsAlgo --min_map_qual 0 SGDP/LP6005442-DNA_G10.hs38DH/QCmetrics/LP6005442-DNA_G10.hs38DH.WgsMetrics.chrY.txt GENOME_TERRITORY MEAN_COVERAGE SD_COVERAGE MEDIAN_COVERAGE MAD_COVERAGE PCT_EXC_MAPQ PCT_EXC_DUPE PCT_EXC_UNPAIRED PCT_EXC_BASEQ PCT_EXC_OVERLAP PCT_EXC_CAPPED PCT_EXC_TOTAL PCT_1X PCT_5X PCT_10X PCT_15X PCT_20X PCT_25X PCT_30X PCT_40X PCT_50X PCT_60X PCT_70X PCT_80X PCT_90X PCT_100X HET_SNP_SENSITIVITY HET_SNP_Q 23636355 22.983 25.576 19 4 0 0.049583 0.001756 0.043859 0.0073251 0.29236 0.39488 0.99665 0.99267 0.9702 0.81597 0.45803 0.16936 0.069068 0.041554 0.035806 0.031919 0.028032 0.0237 0.019513 0.016347 0.99269 21 coverage high_quality_coverage_count 0 79266 1 24392 2 20696 3 22509 4 26415 5 36596 6 56322 7 84450 8 135924 9 217802 10 335425 11 494259 12 697354 13 931921 14 1186419 15 1423266 16 1626117 17 1765107 18 1830785 19 1815266 20 1725026 21 1575853 22 1384838 23 1176614 24 960683 25 765579 26 592128 27 445980 28 328816 29 238041 30 172245 31 124241 32 90401 33 67223 34 51338 35 40203 36 32902 37 27289 38 23514 39 20976 40 18921 41 16917 42 15249 43 14276 44 13259 45 12754 46 11874 47 11308 48 10789 49 10503 50 10027 51 9956 52 9455 53 9171 54 9034 55 9010 56 9006 57 8743 58 8746 59 8734 60 8821 61 8740 62 9018 63 8922 64 8852 65 9324 66 9340 67 9445 68 9651 69 9765 70 9909 71 9833 72 10081 73 10067 74 10301 75 10402 76 10531 77 10489 78 10418 79 10344 80 10276 81 10372 82 10288 83 10214 84 10093 85 9920 86 9799 87 9738 88 9325 89 8957 90 8798 91 8554 92 8099 93 8001 94 7641 95 7353 96 6967 97 6746 98 6502 99 6174 100 5620 101 5414 102 5221 103 4763 104 4591 105 4396 106 4128 107 3978 108 3792 109 3637 110 3385 111 3180 112 3107 113 3013 114 2795 115 2802 116 2700 117 2538 118 2375 119 2274 120 2236 121 2234 122 2001 123 2021 124 1937 125 1854 126 1772 127 1745 128 1762 129 1657 130 1602 131 1635 132 1593 133 1490 134 1544 135 1530 136 1511 137 1474 138 1448 139 1397 140 1408 141 1365 142 1322 143 1321 144 1220 145 1276 146 1200 147 1174 148 1110 149 1172 150 1190 151 1166 152 1198 153 1141 154 1140 155 1108 156 1178 157 1174 158 1072 159 1061 160 1137 161 1039 162 1095 163 985 164 1048 165 1061 166 1019 167 1093 168 994 169 1003 170 996 171 990 172 925 173 968 174 956 175 928 176 919 177 900 178 943 179 859 180 884 181 870 182 815 183 805 184 787 185 761 186 780 187 792 188 763 189 785 190 801 191 782 192 805 193 797 194 764 195 733 196 761 197 754 198 735 199 778 200 795 201 765 202 687 203 744 204 684 205 698 206 717 207 690 208 644 209 693 210 664 211 680 212 613 213 672 214 588 215 581 216 630 217 622 218 583 219 601 220 626 221 639 222 627 223 572 224 582 225 563 226 593 227 588 228 588 229 550 230 512 231 563 232 502 233 538 234 570 235 590 236 582 237 524 238 564 239 562 240 611 241 554 242 568 243 547 244 515 245 519 246 544 247 575 248 556 249 513 250 188326