#SentieonCommandLine: /lustre8/home/ykawai-tnproj-pg/packages/sentieon-genomics-201911/libexec/driver -t 8 -r /lustre8/home/ncbn-pg/data/resource/Homo_sapiens_assembly38.fasta --interval /lustre8/home/ncbn-pg/data/resource/picard-interval-list/GRCh38.chrX.interval_list -i SGDP/LP6005442-DNA_H11.hs38DH/LP6005442-DNA_H11.hs38DH.cram --algo WgsMetricsAlgo --min_map_qual 0 SGDP/LP6005442-DNA_H11.hs38DH/QCmetrics/LP6005442-DNA_H11.hs38DH.WgsMetrics.chrX.txt GENOME_TERRITORY MEAN_COVERAGE SD_COVERAGE MEDIAN_COVERAGE MAD_COVERAGE PCT_EXC_MAPQ PCT_EXC_DUPE PCT_EXC_UNPAIRED PCT_EXC_BASEQ PCT_EXC_OVERLAP PCT_EXC_CAPPED PCT_EXC_TOTAL PCT_1X PCT_5X PCT_10X PCT_15X PCT_20X PCT_25X PCT_30X PCT_40X PCT_50X PCT_60X PCT_70X PCT_80X PCT_90X PCT_100X HET_SNP_SENSITIVITY HET_SNP_Q 152114341 33.583 8.7769 34 5 0 0.013465 0.00097397 0.037355 0.0042948 0.00023686 0.056326 0.99905 0.99592 0.99146 0.98475 0.96715 0.90247 0.72414 0.19337 0.016958 0.0041915 0.0027405 0.0019436 0.0014204 0.0010597 0.99737 26 coverage high_quality_coverage_count 0 144324 1 112531 2 115088 3 123767 4 125217 5 127760 6 129514 7 134656 8 138646 9 147311 10 158856 11 175288 12 196995 13 225543 14 264438 15 319562 16 392067 17 495530 18 638421 19 831508 20 1089220 21 1434002 22 1867476 23 2403743 24 3044009 25 3770781 26 4577816 27 5431633 28 6273400 29 7073403 30 7782855 31 8341704 32 8740077 33 8925795 34 8909661 35 8695057 36 8283974 37 7720198 38 7044906 39 6293436 40 5497623 41 4713331 42 3968219 43 3268779 44 2653857 45 2110367 46 1651916 47 1274741 48 968444 49 727280 50 537493 51 396041 52 289352 53 211738 54 153992 55 113445 56 85024 57 64259 58 50463 59 40217 60 33792 61 29512 62 26058 63 23361 64 21432 65 19524 66 18111 67 17094 68 16191 69 15650 70 14753 71 14071 72 13204 73 12886 74 12461 75 11762 76 11255 77 10650 78 10270 79 9910 80 9359 81 9074 82 8543 83 8714 84 7952 85 7723 86 7402 87 7230 88 7061 89 6527 90 6362 91 6141 92 5858 93 5763 94 5509 95 5397 96 5317 97 5148 98 4837 99 4538 100 4306 101 4185 102 4184 103 3914 104 3746 105 3554 106 3365 107 3235 108 2996 109 3051 110 2943 111 2931 112 2763 113 2811 114 2607 115 2506 116 2475 117 2386 118 2289 119 2092 120 2092 121 1969 122 1866 123 1907 124 1793 125 1794 126 1810 127 1715 128 1578 129 1494 130 1538 131 1445 132 1423 133 1361 134 1325 135 1299 136 1266 137 1255 138 1143 139 1129 140 1167 141 1029 142 1056 143 1018 144 1053 145 1014 146 987 147 937 148 939 149 930 150 832 151 824 152 923 153 872 154 810 155 822 156 711 157 775 158 759 159 726 160 660 161 691 162 687 163 669 164 673 165 696 166 617 167 612 168 599 169 564 170 580 171 555 172 551 173 530 174 557 175 489 176 480 177 535 178 512 179 479 180 496 181 451 182 449 183 463 184 484 185 481 186 427 187 441 188 425 189 447 190 466 191 428 192 453 193 445 194 431 195 433 196 414 197 433 198 413 199 433 200 414 201 422 202 412 203 392 204 392 205 430 206 364 207 387 208 402 209 381 210 418 211 415 212 436 213 455 214 389 215 378 216 359 217 417 218 401 219 366 220 396 221 385 222 397 223 351 224 386 225 403 226 405 227 413 228 396 229 334 230 344 231 342 232 301 233 349 234 329 235 306 236 279 237 280 238 261 239 244 240 237 241 243 242 229 243 228 244 193 245 220 246 206 247 206 248 188 249 162 250 11773