#SentieonCommandLine: /lustre8/home/ykawai-tnproj-pg/packages/sentieon-genomics-201911/libexec/driver -t 8 -r /lustre8/home/ncbn-pg/data/resource/Homo_sapiens_assembly38.fasta --interval /lustre8/home/ncbn-pg/data/resource/picard-interval-list/GRCh38.chrY.interval_list -i SGDP/LP6005442-DNA_H11.hs38DH/LP6005442-DNA_H11.hs38DH.cram --algo WgsMetricsAlgo --min_map_qual 0 SGDP/LP6005442-DNA_H11.hs38DH/QCmetrics/LP6005442-DNA_H11.hs38DH.WgsMetrics.chrY.txt
GENOME_TERRITORY	MEAN_COVERAGE	SD_COVERAGE	MEDIAN_COVERAGE	MAD_COVERAGE	PCT_EXC_MAPQ	PCT_EXC_DUPE	PCT_EXC_UNPAIRED	PCT_EXC_BASEQ	PCT_EXC_OVERLAP	PCT_EXC_CAPPED	PCT_EXC_TOTAL	PCT_1X	PCT_5X	PCT_10X	PCT_15X	PCT_20X	PCT_25X	PCT_30X	PCT_40X	PCT_50X	PCT_60X	PCT_70X	PCT_80X	PCT_90X	PCT_100X	HET_SNP_SENSITIVITY	HET_SNP_Q	
23636355	2.3444	17.292	0	0	0	0.04468	0.0044237	0.038251	0.023306	0.35403	0.46469	0.14419	0.063897	0.034574	0.023169	0.018075	0.015346	0.013499	0.011136	0.0097848	0.0088548	0.0081178	0.0074854	0.006976	0.006552	0.10373	0	

coverage	high_quality_coverage_count	
0	20228175
1	849159
2	467960
3	328537
4	252233
5	198549
6	161560
7	133791
8	110147
9	89047
10	75723
11	62535
12	51367
13	43294
14	36636
15	31264
16	26989
17	23381
18	20766
19	18026
20	15525
21	14109
22	12511
23	11510
24	10835
25	10097
26	9406
27	8531
28	7962
29	7664
30	7390
31	6865
32	6352
33	5831
34	5716
35	5216
36	4852
37	4815
38	4604
39	4220
40	4124
41	3757
42	3650
43	3296
44	3196
45	2994
46	2952
47	2894
48	2589
49	2477
50	2385
51	2386
52	2255
53	2300
54	2310
55	2233
56	2178
57	2032
58	1965
59	1936
60	1884
61	1874
62	1848
63	1879
64	1705
65	1639
66	1663
67	1681
68	1660
69	1587
70	1577
71	1545
72	1579
73	1553
74	1530
75	1482
76	1445
77	1410
78	1436
79	1392
80	1371
81	1320
82	1290
83	1269
84	1194
85	1201
86	1124
87	1119
88	1036
89	1115
90	1043
91	1030
92	1046
93	1034
94	1050
95	1026
96	1010
97	940
98	965
99	879
100	882
101	904
102	905
103	884
104	925
105	882
106	956
107	843
108	873
109	891
110	896
111	785
112	796
113	792
114	785
115	778
116	793
117	771
118	858
119	784
120	821
121	877
122	796
123	810
124	776
125	795
126	750
127	790
128	767
129	742
130	747
131	760
132	765
133	767
134	788
135	765
136	769
137	719
138	669
139	663
140	667
141	635
142	699
143	747
144	779
145	735
146	798
147	765
148	750
149	753
150	781
151	853
152	829
153	833
154	818
155	838
156	847
157	788
158	829
159	785
160	761
161	833
162	813
163	810
164	748
165	724
166	739
167	701
168	715
169	728
170	665
171	611
172	618
173	646
174	647
175	610
176	612
177	594
178	565
179	583
180	585
181	549
182	558
183	537
184	533
185	531
186	518
187	522
188	485
189	552
190	519
191	472
192	464
193	471
194	503
195	437
196	453
197	479
198	440
199	468
200	451
201	502
202	470
203	427
204	419
205	456
206	484
207	464
208	456
209	459
210	452
211	445
212	433
213	423
214	430
215	476
216	439
217	431
218	445
219	409
220	463
221	485
222	459
223	407
224	431
225	455
226	421
227	453
228	461
229	438
230	424
231	442
232	405
233	386
234	411
235	406
236	420
237	378
238	372
239	398
240	372
241	385
242	361
243	378
244	362
245	370
246	387
247	377
248	337
249	393
250	62010