#SentieonCommandLine: /lustre8/home/ykawai-tnproj-pg/packages/sentieon-genomics-201911/libexec/driver -t 8 -r /lustre8/home/ncbn-pg/data/resource/Homo_sapiens_assembly38.fasta --interval /lustre8/home/ncbn-pg/data/resource/picard-interval-list/GRCh38.chrX.interval_list -i SGDP/LP6005443-DNA_D09.hs38DH/LP6005443-DNA_D09.hs38DH.cram --algo WgsMetricsAlgo --min_map_qual 0 SGDP/LP6005443-DNA_D09.hs38DH/QCmetrics/LP6005443-DNA_D09.hs38DH.WgsMetrics.chrX.txt GENOME_TERRITORY MEAN_COVERAGE SD_COVERAGE MEDIAN_COVERAGE MAD_COVERAGE PCT_EXC_MAPQ PCT_EXC_DUPE PCT_EXC_UNPAIRED PCT_EXC_BASEQ PCT_EXC_OVERLAP PCT_EXC_CAPPED PCT_EXC_TOTAL PCT_1X PCT_5X PCT_10X PCT_15X PCT_20X PCT_25X PCT_30X PCT_40X PCT_50X PCT_60X PCT_70X PCT_80X PCT_90X PCT_100X HET_SNP_SENSITIVITY HET_SNP_Q 152114341 18.83 5.5943 19 3 0 0.013842 0.0021662 0.037093 0.008042 0.00028194 0.061425 0.99864 0.99403 0.9707 0.81258 0.43007 0.12168 0.021763 0.0024786 0.0010508 0.0006034 0.00041211 0.00029761 0.00022613 0.00017474 0.99448 23 coverage high_quality_coverage_count 0 206533 1 134333 2 152627 3 185831 4 229060 5 291859 6 398586 7 579761 8 890061 9 1388062 10 2144366 11 3207712 12 4573524 13 6189700 14 7937049 15 9639314 16 11108409 17 12161798 18 12670814 19 12605600 20 11972934 21 10898375 22 9530926 23 8012745 24 6494451 25 5091404 26 3851956 27 2831110 28 2021136 29 1403852 30 957699 31 644989 32 432430 33 289381 34 196774 35 136622 36 98547 37 73470 38 57100 39 46405 40 38320 41 32785 42 27826 43 24025 44 20929 45 18681 46 16353 47 14157 48 12904 49 11214 50 10022 51 9156 52 8475 53 7558 54 6810 55 6283 56 5573 57 5082 58 4828 59 4269 60 3838 61 3578 62 3283 63 3114 64 2846 65 2691 66 2527 67 2440 68 2476 69 2305 70 2291 71 2104 72 1989 73 1774 74 1763 75 1623 76 1664 77 1519 78 1376 79 1314 80 1322 81 1201 82 1153 83 1196 84 1040 85 1052 86 1032 87 986 88 951 89 941 90 914 91 905 92 915 93 798 94 787 95 745 96 723 97 641 98 700 99 688 100 705 101 671 102 641 103 613 104 654 105 557 106 543 107 519 108 515 109 470 110 425 111 426 112 435 113 383 114 407 115 400 116 391 117 401 118 367 119 347 120 329 121 329 122 324 123 347 124 266 125 299 126 298 127 288 128 262 129 237 130 264 131 271 132 293 133 207 134 235 135 253 136 248 137 247 138 241 139 198 140 227 141 214 142 204 143 203 144 202 145 199 146 218 147 198 148 185 149 195 150 168 151 141 152 130 153 139 154 152 155 139 156 143 157 127 158 107 159 104 160 119 161 104 162 115 163 117 164 114 165 100 166 94 167 102 168 91 169 112 170 98 171 106 172 116 173 98 174 101 175 102 176 106 177 95 178 96 179 89 180 102 181 88 182 97 183 110 184 105 185 87 186 86 187 101 188 102 189 84 190 98 191 98 192 96 193 82 194 54 195 65 196 55 197 72 198 59 199 64 200 59 201 69 202 54 203 62 204 56 205 48 206 53 207 48 208 44 209 49 210 40 211 35 212 35 213 47 214 39 215 35 216 39 217 33 218 27 219 37 220 36 221 31 222 31 223 34 224 32 225 24 226 32 227 34 228 38 229 28 230 37 231 28 232 25 233 29 234 25 235 24 236 18 237 17 238 27 239 20 240 30 241 20 242 25 243 24 244 20 245 20 246 20 247 18 248 16 249 21 250 2407