#SentieonCommandLine: /lustre8/home/ykawai-tnproj-pg/packages/sentieon-genomics-201911/libexec/driver -t 8 -r /lustre8/home/ncbn-pg/data/resource/Homo_sapiens_assembly38.fasta --interval /lustre8/home/ncbn-pg/data/resource/picard-interval-list/GRCh38.chrX.interval_list -i SGDP/LP6005443-DNA_E05.hs38DH/LP6005443-DNA_E05.hs38DH.cram --algo WgsMetricsAlgo --min_map_qual 0 SGDP/LP6005443-DNA_E05.hs38DH/QCmetrics/LP6005443-DNA_E05.hs38DH.WgsMetrics.chrX.txt
GENOME_TERRITORY	MEAN_COVERAGE	SD_COVERAGE	MEDIAN_COVERAGE	MAD_COVERAGE	PCT_EXC_MAPQ	PCT_EXC_DUPE	PCT_EXC_UNPAIRED	PCT_EXC_BASEQ	PCT_EXC_OVERLAP	PCT_EXC_CAPPED	PCT_EXC_TOTAL	PCT_1X	PCT_5X	PCT_10X	PCT_15X	PCT_20X	PCT_25X	PCT_30X	PCT_40X	PCT_50X	PCT_60X	PCT_70X	PCT_80X	PCT_90X	PCT_100X	HET_SNP_SENSITIVITY	HET_SNP_Q	
152114341	21.291	6.2725	21	4	0	0.012082	0.0014708	0.050334	0.0030285	4.3212e-05	0.066958	0.99872	0.99445	0.97907	0.89132	0.61805	0.27012	0.072699	0.0052789	0.0019135	0.00098503	0.00060408	0.00040558	0.00028444	0.00020754	0.9954	23	

coverage	high_quality_coverage_count	
0	195398
1	134189
2	146164
3	169500
4	198397
5	241568
6	304713
7	405896
8	569514
9	818947
10	1193316
11	1735334
12	2468344
13	3411519
14	4538961
15	5814552
16	7168240
17	8471096
18	9612762
19	10501149
20	11037428
21	11188222
22	10942543
23	10329227
24	9428691
25	8337921
26	7142012
27	5948478
28	4811181
29	3790454
30	2907070
31	2175669
32	1591967
33	1151577
34	820097
35	577097
36	403944
37	283189
38	199461
39	145553
40	107951
41	82572
42	65916
43	54489
44	45985
45	39648
46	34277
47	30467
48	26965
49	23659
50	21568
51	19303
52	17390
53	15562
54	14054
55	12685
56	11487
57	10449
58	9737
59	9000
60	8186
61	7565
62	6984
63	6485
64	5701
65	5308
66	4887
67	4491
68	4264
69	4077
70	3860
71	3580
72	3448
73	3214
74	3043
75	2799
76	2699
77	2568
78	2507
79	2477
80	2277
81	2181
82	2033
83	2041
84	1783
85	1835
86	1719
87	1536
88	1519
89	1502
90	1337
91	1280
92	1330
93	1200
94	1201
95	1147
96	1120
97	1043
98	1057
99	983
100	1021
101	1003
102	988
103	958
104	960
105	944
106	801
107	789
108	756
109	746
110	700
111	703
112	656
113	662
114	647
115	622
116	574
117	537
118	483
119	474
120	481
121	453
122	484
123	380
124	434
125	463
126	418
127	398
128	388
129	408
130	380
131	389
132	315
133	319
134	295
135	342
136	279
137	283
138	234
139	277
140	232
141	264
142	240
143	232
144	210
145	209
146	213
147	215
148	191
149	166
150	185
151	155
152	173
153	162
154	164
155	152
156	164
157	158
158	137
159	152
160	129
161	109
162	114
163	107
164	99
165	96
166	82
167	80
168	99
169	77
170	95
171	96
172	107
173	78
174	65
175	81
176	68
177	88
178	69
179	81
180	70
181	65
182	67
183	54
184	77
185	62
186	77
187	57
188	62
189	69
190	69
191	65
192	66
193	64
194	57
195	75
196	68
197	56
198	59
199	44
200	57
201	46
202	48
203	41
204	46
205	59
206	63
207	49
208	33
209	34
210	49
211	42
212	42
213	22
214	26
215	24
216	33
217	33
218	35
219	31
220	20
221	29
222	39
223	33
224	28
225	29
226	21
227	23
228	26
229	18
230	15
231	12
232	16
233	6
234	10
235	8
236	8
237	10
238	6
239	4
240	4
241	6
242	5
243	11
244	8
245	10
246	7
247	7
248	7
249	5
250	1005