#SentieonCommandLine: /lustre8/home/ykawai-tnproj-pg/packages/sentieon-genomics-201911/libexec/driver -t 8 -r /lustre8/home/ncbn-pg/data/resource/Homo_sapiens_assembly38.fasta --interval /lustre8/home/ncbn-pg/data/resource/picard-interval-list/GRCh38.autosome-PAR.interval_list -i SGDP/LP6005443-DNA_F02.hs38DH/LP6005443-DNA_F02.hs38DH.cram --algo WgsMetricsAlgo --min_map_qual 0 SGDP/LP6005443-DNA_F02.hs38DH/QCmetrics/LP6005443-DNA_F02.hs38DH.WgsMetrics.autosome.txt GENOME_TERRITORY MEAN_COVERAGE SD_COVERAGE MEDIAN_COVERAGE MAD_COVERAGE PCT_EXC_MAPQ PCT_EXC_DUPE PCT_EXC_UNPAIRED PCT_EXC_BASEQ PCT_EXC_OVERLAP PCT_EXC_CAPPED PCT_EXC_TOTAL PCT_1X PCT_5X PCT_10X PCT_15X PCT_20X PCT_25X PCT_30X PCT_40X PCT_50X PCT_60X PCT_70X PCT_80X PCT_90X PCT_100X HET_SNP_SENSITIVITY HET_SNP_Q 2747965384 36.703 12.057 36 5 0 0.028093 0.0015573 0.031527 0.0040861 0.016148 0.081412 0.9988 0.99659 0.9936 0.98816 0.9731 0.92544 0.80275 0.34402 0.057656 0.010682 0.0064662 0.0049401 0.0039476 0.0032599 0.99764 26 coverage high_quality_coverage_count 0 3288834 1 1654334 2 1498346 3 1464493 4 1463846 5 1478147 6 1522371 7 1600016 8 1721619 9 1883115 10 2127313 11 2437621 12 2864930 13 3410650 14 4119312 15 5048325 16 6241153 17 7813096 18 9828055 19 12447044 20 15781018 21 19953512 22 25129667 23 31366637 24 38741407 25 47179638 26 56647905 27 66899428 28 77717676 29 88708819 30 99551185 31 109755426 32 118901905 33 126583298 34 132389666 35 136151879 36 137671498 37 136928776 38 133891819 39 128760277 40 121833115 41 113455270 42 103968455 43 93774131 44 83293067 45 72854285 46 62798085 47 53353267 48 44675430 49 36900439 50 30057461 51 24192461 52 19245968 53 15134492 54 11786196 55 9100793 56 6985703 57 5350049 58 4090922 59 3137733 60 2425740 61 1898444 62 1513152 63 1231014 64 1023004 65 872490 66 760730 67 678787 68 615610 69 566192 70 527254 71 495604 72 468678 73 442940 74 420836 75 401991 76 383882 77 365588 78 350708 79 336166 80 323538 81 310889 82 297856 83 287058 84 275810 85 265252 86 254862 87 246288 88 237327 89 228539 90 219871 91 211300 92 204158 93 197832 94 190619 95 183966 96 178622 97 173332 98 167546 99 162484 100 157141 101 152350 102 147931 103 144198 104 140594 105 137740 106 134511 107 131686 108 128397 109 125044 110 122019 111 118840 112 116330 113 113587 114 111212 115 109139 116 106919 117 103869 118 101498 119 99876 120 97068 121 94579 122 91588 123 90199 124 87489 125 85422 126 83882 127 81559 128 79520 129 77761 130 75508 131 72983 132 71306 133 69705 134 67997 135 66153 136 64508 137 63008 138 60963 139 59364 140 57677 141 56595 142 55336 143 54109 144 52988 145 51235 146 50201 147 49269 148 48308 149 47042 150 46288 151 45493 152 44349 153 42911 154 42637 155 41612 156 41116 157 39705 158 39104 159 38263 160 37480 161 36749 162 36354 163 35074 164 34666 165 33934 166 33624 167 32692 168 32356 169 31691 170 31533 171 30619 172 30603 173 29528 174 29579 175 28745 176 28573 177 28038 178 27283 179 26996 180 26638 181 26408 182 25651 183 25220 184 24812 185 24318 186 23886 187 23710 188 23424 189 23215 190 22720 191 22525 192 22377 193 21838 194 21368 195 21192 196 21186 197 20633 198 20280 199 20030 200 19793 201 19890 202 19582 203 19084 204 19079 205 18786 206 18405 207 18248 208 17892 209 17616 210 17483 211 17362 212 16992 213 16896 214 16599 215 16680 216 16205 217 15855 218 15845 219 15692 220 15496 221 15241 222 15079 223 15011 224 14934 225 14829 226 14500 227 14213 228 14145 229 14296 230 14070 231 13758 232 13619 233 13567 234 13317 235 13067 236 13317 237 12892 238 12753 239 12564 240 12649 241 12312 242 12257 243 11935 244 11891 245 11755 246 11638 247 11594 248 11462 249 11238 250 2119435