#SentieonCommandLine: /lustre8/home/ykawai-tnproj-pg/packages/sentieon-genomics-201911/libexec/driver -t 8 -r /lustre8/home/ncbn-pg/data/resource/Homo_sapiens_assembly38.fasta --interval /lustre8/home/ncbn-pg/data/resource/picard-interval-list/GRCh38.chrX.interval_list -i SGDP/LP6005443-DNA_F02.hs38DH/LP6005443-DNA_F02.hs38DH.cram --algo WgsMetricsAlgo --min_map_qual 0 SGDP/LP6005443-DNA_F02.hs38DH/QCmetrics/LP6005443-DNA_F02.hs38DH.WgsMetrics.chrX.txt
GENOME_TERRITORY	MEAN_COVERAGE	SD_COVERAGE	MEDIAN_COVERAGE	MAD_COVERAGE	PCT_EXC_MAPQ	PCT_EXC_DUPE	PCT_EXC_UNPAIRED	PCT_EXC_BASEQ	PCT_EXC_OVERLAP	PCT_EXC_CAPPED	PCT_EXC_TOTAL	PCT_1X	PCT_5X	PCT_10X	PCT_15X	PCT_20X	PCT_25X	PCT_30X	PCT_40X	PCT_50X	PCT_60X	PCT_70X	PCT_80X	PCT_90X	PCT_100X	HET_SNP_SENSITIVITY	HET_SNP_Q	
152114341	18.399	6.1898	18	3	0	0.02	0.0017752	0.029746	0.0039452	0.0002923	0.055759	0.99734	0.98943	0.95765	0.77553	0.39847	0.11445	0.022065	0.0033028	0.0017324	0.0010924	0.00075024	0.00054299	0.00040719	0.00031752	0.99135	21	

coverage	high_quality_coverage_count	
0	404790
1	290073
2	285371
3	298571
4	329768
5	402599
6	543611
7	803479
8	1219929
9	1864366
10	2769591
11	3953482
12	5393339
13	6987510
14	8598483
15	10069307
16	11227388
17	11966905
18	12188497
19	11904846
20	11149550
21	10054629
22	8739463
23	7325108
24	5934895
25	4655008
26	3548306
27	2627193
28	1890874
29	1331030
30	918796
31	621864
32	420956
33	284384
34	195508
35	137111
36	98699
37	73431
38	56939
39	46282
40	38805
41	33062
42	29086
43	25703
44	23265
45	21046
46	19300
47	17561
48	16302
49	14753
50	13314
51	12401
52	11482
53	10509
54	9838
55	9154
56	8490
57	7899
58	7393
59	6883
60	6584
61	6214
62	5964
63	5698
64	5341
65	4934
66	4593
67	4480
68	4203
69	4030
70	4016
71	3611
72	3496
73	3256
74	3160
75	3070
76	2895
77	2754
78	2694
79	2575
80	2551
81	2320
82	2285
83	2158
84	2047
85	1952
86	1890
87	1892
88	1804
89	1758
90	1710
91	1612
92	1544
93	1441
94	1310
95	1273
96	1275
97	1198
98	1154
99	1122
100	1063
101	1069
102	1066
103	1050
104	988
105	967
106	846
107	895
108	841
109	885
110	799
111	751
112	747
113	752
114	710
115	659
116	656
117	679
118	672
119	615
120	628
121	605
122	563
123	560
124	564
125	555
126	572
127	511
128	485
129	467
130	420
131	462
132	413
133	417
134	426
135	403
136	377
137	375
138	350
139	377
140	330
141	349
142	342
143	341
144	316
145	317
146	313
147	340
148	288
149	326
150	316
151	296
152	289
153	307
154	294
155	273
156	246
157	271
158	267
159	309
160	263
161	251
162	234
163	240
164	253
165	211
166	215
167	226
168	202
169	224
170	239
171	201
172	211
173	208
174	184
175	194
176	187
177	180
178	187
179	180
180	187
181	190
182	190
183	178
184	174
185	181
186	163
187	163
188	167
189	162
190	159
191	165
192	167
193	128
194	141
195	141
196	162
197	130
198	129
199	137
200	142
201	137
202	117
203	113
204	131
205	119
206	110
207	130
208	136
209	95
210	127
211	127
212	107
213	103
214	85
215	104
216	104
217	90
218	91
219	107
220	96
221	97
222	89
223	95
224	76
225	79
226	83
227	67
228	67
229	80
230	86
231	86
232	79
233	98
234	78
235	80
236	86
237	68
238	76
239	72
240	63
241	68
242	61
243	52
244	52
245	66
246	66
247	58
248	70
249	56
250	3901