#SentieonCommandLine: /lustre8/home/ykawai-tnproj-pg/packages/sentieon-genomics-201911/libexec/driver -t 8 -r /lustre8/home/ncbn-pg/data/resource/Homo_sapiens_assembly38.fasta --interval /lustre8/home/ncbn-pg/data/resource/picard-interval-list/GRCh38.autosome-PAR.interval_list -i SGDP/LP6005443-DNA_F04.hs38DH/LP6005443-DNA_F04.hs38DH.cram --algo WgsMetricsAlgo --min_map_qual 0 SGDP/LP6005443-DNA_F04.hs38DH/QCmetrics/LP6005443-DNA_F04.hs38DH.WgsMetrics.autosome.txt GENOME_TERRITORY MEAN_COVERAGE SD_COVERAGE MEDIAN_COVERAGE MAD_COVERAGE PCT_EXC_MAPQ PCT_EXC_DUPE PCT_EXC_UNPAIRED PCT_EXC_BASEQ PCT_EXC_OVERLAP PCT_EXC_CAPPED PCT_EXC_TOTAL PCT_1X PCT_5X PCT_10X PCT_15X PCT_20X PCT_25X PCT_30X PCT_40X PCT_50X PCT_60X PCT_70X PCT_80X PCT_90X PCT_100X HET_SNP_SENSITIVITY HET_SNP_Q 2747965384 36.691 11.703 36 5 0 0.014139 0.0011777 0.047931 0.0041693 0.012137 0.079554 0.99852 0.99622 0.99325 0.98806 0.97395 0.9286 0.80865 0.34443 0.054393 0.0096246 0.0059348 0.0045231 0.0035856 0.0029408 0.99727 26 coverage high_quality_coverage_count 0 4072931 1 1781142 2 1564807 3 1504465 4 1471821 5 1479958 6 1521867 7 1591981 8 1701408 9 1857446 10 2071581 11 2357385 12 2728242 13 3228725 14 3880277 15 4733560 16 5845088 17 7305655 18 9205856 19 11678934 20 14842371 21 18865483 22 23858975 23 29925110 24 37140158 25 45516349 26 54950775 27 65276145 28 76266365 29 87585162 30 98838873 31 109593027 32 119277176 33 127562215 34 134010227 35 138279848 36 140165268 37 139656772 38 136730013 39 131570046 40 124485283 41 115812816 42 105944856 43 95398249 44 84484321 45 73616452 46 63141964 47 53328295 48 44383172 49 36405779 50 29410515 51 23455708 52 18479098 53 14395190 54 11088067 55 8463778 56 6424954 57 4848397 58 3671945 59 2785112 60 2134275 61 1657559 62 1314105 63 1065642 64 886996 65 757729 66 666680 67 599530 68 548749 69 508176 70 477180 71 451441 72 428248 73 408873 74 389757 75 373545 76 358324 77 344563 78 330613 79 316745 80 304833 81 293736 82 282740 83 272063 84 259978 85 250570 86 241395 87 232498 88 223141 89 215161 90 207197 91 200480 92 192658 93 185282 94 178368 95 173105 96 166827 97 161394 98 155117 99 151376 100 146180 101 141443 102 136683 103 132916 104 128133 105 124685 106 121797 107 117673 108 114503 109 111820 110 108705 111 104770 112 101940 113 99432 114 96602 115 94000 116 91282 117 88953 118 86505 119 84367 120 82158 121 80549 122 78361 123 75962 124 74579 125 73086 126 70832 127 69323 128 67141 129 65238 130 64161 131 62789 132 60952 133 59704 134 58255 135 57030 136 55982 137 54388 138 53387 139 52430 140 51417 141 49765 142 49456 143 48274 144 47535 145 46446 146 46238 147 44796 148 44223 149 43185 150 42143 151 41836 152 40936 153 39980 154 39628 155 38836 156 38031 157 37142 158 36499 159 36176 160 35657 161 34949 162 34810 163 33666 164 33550 165 32489 166 32090 167 31822 168 31191 169 30664 170 30177 171 29552 172 29290 173 28919 174 28665 175 27664 176 27797 177 27070 178 27088 179 26742 180 25939 181 25845 182 25330 183 25193 184 24903 185 24702 186 24319 187 23977 188 23611 189 23377 190 22959 191 22359 192 22434 193 22012 194 21613 195 21300 196 21077 197 20547 198 20474 199 19982 200 19715 201 19622 202 19256 203 18986 204 19039 205 18743 206 18408 207 17933 208 18064 209 17734 210 17330 211 17185 212 16696 213 16604 214 16392 215 16297 216 16047 217 15732 218 15701 219 15310 220 15258 221 15105 222 14665 223 14246 224 14059 225 13989 226 13585 227 13518 228 13236 229 13084 230 12882 231 12915 232 12928 233 12503 234 12523 235 12460 236 12099 237 12005 238 11901 239 12020 240 11699 241 11714 242 11577 243 11340 244 11149 245 11003 246 10792 247 10822 248 10713 249 10467 250 1867203