#SentieonCommandLine: /lustre8/home/ykawai-tnproj-pg/packages/sentieon-genomics-201911/libexec/driver -t 8 -r /lustre8/home/ncbn-pg/data/resource/Homo_sapiens_assembly38.fasta --interval /lustre8/home/ncbn-pg/data/resource/picard-interval-list/GRCh38.chrX.interval_list -i SGDP/LP6005443-DNA_F06.hs38DH/LP6005443-DNA_F06.hs38DH.cram --algo WgsMetricsAlgo --min_map_qual 0 SGDP/LP6005443-DNA_F06.hs38DH/QCmetrics/LP6005443-DNA_F06.hs38DH.WgsMetrics.chrX.txt
GENOME_TERRITORY	MEAN_COVERAGE	SD_COVERAGE	MEDIAN_COVERAGE	MAD_COVERAGE	PCT_EXC_MAPQ	PCT_EXC_DUPE	PCT_EXC_UNPAIRED	PCT_EXC_BASEQ	PCT_EXC_OVERLAP	PCT_EXC_CAPPED	PCT_EXC_TOTAL	PCT_1X	PCT_5X	PCT_10X	PCT_15X	PCT_20X	PCT_25X	PCT_30X	PCT_40X	PCT_50X	PCT_60X	PCT_70X	PCT_80X	PCT_90X	PCT_100X	HET_SNP_SENSITIVITY	HET_SNP_Q	
152114341	22.135	6.3783	22	4	0	0.014305	0.0024128	0.050298	0.0055078	0.00026935	0.072793	0.99876	0.99574	0.98556	0.91974	0.67555	0.31751	0.091295	0.0067158	0.0024218	0.0012075	0.00070176	0.00045921	0.00033255	0.00025412	0.9964	24	

coverage	high_quality_coverage_count	
0	189361
1	100330
2	106557
3	118088
4	133864
5	160481
6	201892
7	268348
8	372746
9	545016
10	815281
11	1221763
12	1803232
13	2584193
14	3587428
15	4786441
16	6117803
17	7494740
18	8809846
19	9936692
20	10770977
21	11236483
22	11297174
23	10935715
24	10222165
25	9250597
26	8100077
27	6867262
28	5657182
29	4535387
30	3542699
31	2701030
32	2011247
33	1469998
34	1054027
35	746669
36	523329
37	367457
38	261684
39	187504
40	139592
41	106515
42	83561
43	68835
44	58605
45	49324
46	43165
47	38592
48	34590
49	30409
50	27658
51	24990
52	22618
53	20584
54	18559
55	16677
56	15120
57	13889
58	12803
59	11814
60	11079
61	9994
62	9284
63	8345
64	7680
65	7136
66	6586
67	6060
68	5548
69	5216
70	4893
71	4342
72	4267
73	3967
74	3683
75	3605
76	3388
77	3073
78	2966
79	2712
80	2587
81	2454
82	2184
83	2054
84	1910
85	1793
86	1692
87	1640
88	1484
89	1469
90	1445
91	1440
92	1249
93	1234
94	1206
95	1120
96	1060
97	1111
98	1057
99	1008
100	980
101	1011
102	893
103	899
104	913
105	878
106	797
107	855
108	750
109	779
110	746
111	651
112	654
113	648
114	626
115	586
116	546
117	551
118	566
119	531
120	585
121	522
122	532
123	533
124	544
125	512
126	479
127	476
128	460
129	412
130	418
131	412
132	404
133	339
134	363
135	372
136	337
137	341
138	391
139	281
140	316
141	299
142	279
143	258
144	246
145	240
146	272
147	212
148	224
149	266
150	212
151	249
152	208
153	200
154	192
155	214
156	149
157	180
158	175
159	184
160	174
161	173
162	134
163	181
164	180
165	176
166	153
167	146
168	133
169	132
170	120
171	139
172	127
173	135
174	152
175	118
176	105
177	110
178	122
179	120
180	137
181	126
182	117
183	103
184	115
185	95
186	100
187	75
188	87
189	97
190	76
191	90
192	81
193	86
194	85
195	71
196	66
197	74
198	84
199	65
200	74
201	72
202	55
203	70
204	76
205	70
206	62
207	62
208	65
209	74
210	57
211	61
212	77
213	64
214	63
215	60
216	64
217	66
218	72
219	73
220	72
221	53
222	77
223	62
224	68
225	62
226	58
227	55
228	66
229	65
230	67
231	56
232	45
233	54
234	58
235	59
236	42
237	39
238	57
239	42
240	43
241	54
242	44
243	34
244	43
245	30
246	33
247	43
248	28
249	39
250	2962