#SentieonCommandLine: /lustre8/home/ykawai-tnproj-pg/packages/sentieon-genomics-201911/libexec/driver -t 8 -r /lustre8/home/ncbn-pg/data/resource/Homo_sapiens_assembly38.fasta --interval /lustre8/home/ncbn-pg/data/resource/picard-interval-list/GRCh38.chrY.interval_list -i SGDP/LP6005443-DNA_F06.hs38DH/LP6005443-DNA_F06.hs38DH.cram --algo WgsMetricsAlgo --min_map_qual 0 SGDP/LP6005443-DNA_F06.hs38DH/QCmetrics/LP6005443-DNA_F06.hs38DH.WgsMetrics.chrY.txt
GENOME_TERRITORY	MEAN_COVERAGE	SD_COVERAGE	MEDIAN_COVERAGE	MAD_COVERAGE	PCT_EXC_MAPQ	PCT_EXC_DUPE	PCT_EXC_UNPAIRED	PCT_EXC_BASEQ	PCT_EXC_OVERLAP	PCT_EXC_CAPPED	PCT_EXC_TOTAL	PCT_1X	PCT_5X	PCT_10X	PCT_15X	PCT_20X	PCT_25X	PCT_30X	PCT_40X	PCT_50X	PCT_60X	PCT_70X	PCT_80X	PCT_90X	PCT_100X	HET_SNP_SENSITIVITY	HET_SNP_Q	
23636355	26.421	27.227	22	4	0	0.1057	0.0013993	0.038852	0.0078472	0.39329	0.54709	0.99909	0.99684	0.98728	0.91891	0.67435	0.33463	0.12965	0.048706	0.039472	0.034489	0.030388	0.026331	0.022392	0.019046	0.99706	25	

coverage	high_quality_coverage_count	
0	21545
1	10971
2	12573
3	14137
4	15477
5	19462
6	26737
7	38378
8	56075
9	85362
10	130985
11	198459
12	292695
13	417088
14	576767
15	762053
16	966152
17	1170849
18	1363409
19	1518121
20	1626175
21	1676001
22	1660974
23	1593651
24	1472747
25	1318015
26	1141950
27	961799
28	790554
29	632790
30	495376
31	380025
32	287060
33	216213
34	160529
35	119936
36	89947
37	69003
38	53097
39	41987
40	34142
41	29178
42	25883
43	23328
44	21097
45	19534
46	17975
47	16660
48	15754
49	14706
50	14054
51	13134
52	12664
53	12185
54	11805
55	11530
56	10971
57	10779
58	10595
59	10072
60	10011
61	9880
62	9923
63	9751
64	9830
65	9679
66	9394
67	9504
68	9462
69	9482
70	9646
71	9485
72	9468
73	9603
74	9649
75	9601
76	9663
77	9588
78	9516
79	9681
80	9282
81	9492
82	9425
83	9400
84	9387
85	9259
86	9350
87	9205
88	9326
89	8969
90	8796
91	8766
92	8457
93	8265
94	7889
95	7788
96	7695
97	7375
98	7217
99	6850
100	6848
101	6424
102	6106
103	5761
104	5523
105	5291
106	5049
107	4682
108	4564
109	4422
110	4012
111	3909
112	3741
113	3632
114	3393
115	3105
116	3000
117	2938
118	2751
119	2576
120	2521
121	2489
122	2310
123	2349
124	2172
125	2122
126	2079
127	1935
128	1956
129	1809
130	1769
131	1697
132	1577
133	1620
134	1603
135	1467
136	1543
137	1471
138	1446
139	1461
140	1401
141	1350
142	1368
143	1321
144	1247
145	1225
146	1155
147	1141
148	1176
149	1068
150	1088
151	1096
152	1086
153	1021
154	1073
155	998
156	1078
157	1041
158	981
159	1044
160	1001
161	1036
162	911
163	965
164	954
165	994
166	930
167	910
168	910
169	876
170	904
171	906
172	840
173	815
174	869
175	843
176	844
177	887
178	882
179	863
180	840
181	848
182	822
183	851
184	841
185	858
186	850
187	826
188	824
189	836
190	774
191	769
192	735
193	802
194	755
195	779
196	798
197	866
198	788
199	771
200	738
201	712
202	688
203	741
204	696
205	730
206	713
207	716
208	727
209	721
210	686
211	710
212	707
213	677
214	714
215	707
216	722
217	697
218	731
219	729
220	716
221	707
222	689
223	704
224	671
225	767
226	706
227	722
228	723
229	686
230	713
231	710
232	642
233	679
234	668
235	695
236	722
237	702
238	641
239	724
240	651
241	623
242	622
243	657
244	643
245	657
246	606
247	622
248	586
249	637
250	233169