#SentieonCommandLine: /lustre8/home/ykawai-tnproj-pg/packages/sentieon-genomics-201911/libexec/driver -t 8 -r /lustre8/home/ncbn-pg/data/resource/Homo_sapiens_assembly38.fasta --interval /lustre8/home/ncbn-pg/data/resource/picard-interval-list/GRCh38.chrX.interval_list -i SGDP/LP6005443-DNA_F07.hs38DH/LP6005443-DNA_F07.hs38DH.cram --algo WgsMetricsAlgo --min_map_qual 0 SGDP/LP6005443-DNA_F07.hs38DH/QCmetrics/LP6005443-DNA_F07.hs38DH.WgsMetrics.chrX.txt GENOME_TERRITORY MEAN_COVERAGE SD_COVERAGE MEDIAN_COVERAGE MAD_COVERAGE PCT_EXC_MAPQ PCT_EXC_DUPE PCT_EXC_UNPAIRED PCT_EXC_BASEQ PCT_EXC_OVERLAP PCT_EXC_CAPPED PCT_EXC_TOTAL PCT_1X PCT_5X PCT_10X PCT_15X PCT_20X PCT_25X PCT_30X PCT_40X PCT_50X PCT_60X PCT_70X PCT_80X PCT_90X PCT_100X HET_SNP_SENSITIVITY HET_SNP_Q 152114341 22.705 6.3959 23 4 0 0.017632 0.0013782 0.044336 0.0051766 0.00014306 0.068666 0.99871 0.99532 0.98498 0.92953 0.71328 0.36243 0.11307 0.0062453 0.0017557 0.00086904 0.00052656 0.00037604 0.00029289 0.00023532 0.99626 24 coverage high_quality_coverage_count 0 195724 1 104596 2 115346 3 135147 4 160923 5 190723 6 226860 7 284497 8 366945 9 504719 10 714003 11 1036168 12 1510309 13 2162154 14 3011086 15 4059184 16 5270573 17 6580472 18 7892692 19 9091509 20 10078906 21 10760766 22 11055667 23 10961698 24 10512262 25 9748081 26 8755618 27 7630646 28 6469166 29 5328097 30 4268946 31 3338706 32 2547110 33 1901545 34 1392433 35 1000542 36 707108 37 499175 38 348818 39 245424 40 173902 41 125446 42 92608 43 70295 44 55249 45 44343 46 37714 47 31762 48 27529 49 24081 50 21243 51 18989 52 16809 53 14714 54 13137 55 11862 56 10922 57 9897 58 9048 59 8253 60 7326 61 6740 62 6146 63 5710 64 5147 65 4918 66 4531 67 4202 68 3796 69 3580 70 3302 71 2970 72 2676 73 2424 74 2259 75 1992 76 1981 77 1784 78 1781 79 1728 80 1617 81 1560 82 1419 83 1331 84 1289 85 1195 86 1175 87 1043 88 1007 89 1012 90 997 91 950 92 953 93 904 94 869 95 897 96 813 97 801 98 781 99 792 100 798 101 732 102 768 103 782 104 704 105 754 106 723 107 646 108 697 109 571 110 589 111 551 112 609 113 549 114 563 115 539 116 521 117 521 118 469 119 459 120 462 121 431 122 415 123 427 124 422 125 381 126 379 127 377 128 392 129 387 130 353 131 360 132 363 133 356 134 281 135 322 136 290 137 284 138 279 139 290 140 247 141 260 142 228 143 266 144 264 145 220 146 243 147 241 148 237 149 260 150 209 151 240 152 192 153 174 154 166 155 200 156 184 157 171 158 198 159 196 160 158 161 186 162 148 163 185 164 172 165 171 166 161 167 163 168 162 169 142 170 165 171 190 172 171 173 137 174 154 175 138 176 149 177 143 178 123 179 122 180 130 181 116 182 126 183 125 184 96 185 113 186 114 187 126 188 107 189 116 190 103 191 117 192 134 193 116 194 100 195 106 196 94 197 92 198 111 199 109 200 99 201 108 202 112 203 80 204 104 205 103 206 111 207 81 208 89 209 90 210 108 211 83 212 97 213 81 214 82 215 72 216 73 217 80 218 66 219 68 220 68 221 68 222 42 223 75 224 64 225 61 226 60 227 65 228 68 229 54 230 57 231 56 232 42 233 53 234 46 235 55 236 59 237 36 238 46 239 38 240 48 241 53 242 42 243 37 244 32 245 42 246 54 247 36 248 43 249 36 250 2890