#SentieonCommandLine: /lustre8/home/ykawai-tnproj-pg/packages/sentieon-genomics-201911/libexec/driver -t 8 -r /lustre8/home/ncbn-pg/data/resource/Homo_sapiens_assembly38.fasta --interval /lustre8/home/ncbn-pg/data/resource/picard-interval-list/GRCh38.chrX.interval_list -i SGDP/LP6005443-DNA_F08.hs38DH/LP6005443-DNA_F08.hs38DH.cram --algo WgsMetricsAlgo --min_map_qual 0 SGDP/LP6005443-DNA_F08.hs38DH/QCmetrics/LP6005443-DNA_F08.hs38DH.WgsMetrics.chrX.txt
GENOME_TERRITORY	MEAN_COVERAGE	SD_COVERAGE	MEDIAN_COVERAGE	MAD_COVERAGE	PCT_EXC_MAPQ	PCT_EXC_DUPE	PCT_EXC_UNPAIRED	PCT_EXC_BASEQ	PCT_EXC_OVERLAP	PCT_EXC_CAPPED	PCT_EXC_TOTAL	PCT_1X	PCT_5X	PCT_10X	PCT_15X	PCT_20X	PCT_25X	PCT_30X	PCT_40X	PCT_50X	PCT_60X	PCT_70X	PCT_80X	PCT_90X	PCT_100X	HET_SNP_SENSITIVITY	HET_SNP_Q	
152114341	20.081	5.687	20	3	0	0.018505	0.001422	0.038443	0.0062331	0.00018747	0.064791	0.99874	0.99481	0.97796	0.86672	0.53505	0.18711	0.038534	0.0025526	0.00089268	0.00048009	0.00032172	0.00023722	0.00018503	0.0001466	0.99544	23	

coverage	high_quality_coverage_count	
0	192018
1	110715
2	129822
3	160295
4	196574
5	246509
6	316643
7	436694
8	625961
9	937136
10	1423187
11	2140361
12	3120516
13	4381335
14	5856379
15	7445982
16	9023969
17	10426218
18	11477763
19	12077193
20	12186109
21	11755360
22	10898172
23	9719125
24	8368601
25	6952972
26	5592452
27	4346268
28	3288422
29	2419999
30	1740314
31	1221860
32	838676
33	570247
34	383854
35	259254
36	178468
37	124553
38	89578
39	66507
40	51311
41	40072
42	32935
43	27704
44	23502
45	20055
46	17076
47	14856
48	13180
49	11800
50	10287
51	8798
52	7950
53	6990
54	6189
55	5566
56	5030
57	4392
58	3983
59	3575
60	3296
61	3044
62	2767
63	2550
64	2525
65	2256
66	2155
67	1948
68	1764
69	1786
70	1586
71	1552
72	1473
73	1340
74	1374
75	1265
76	1179
77	1074
78	1021
79	990
80	944
81	874
82	812
83	768
84	833
85	824
86	766
87	713
88	708
89	696
90	642
91	639
92	655
93	594
94	609
95	565
96	544
97	529
98	550
99	519
100	512
101	507
102	506
103	461
104	444
105	424
106	405
107	416
108	388
109	346
110	374
111	350
112	374
113	337
114	333
115	351
116	330
117	331
118	329
119	317
120	281
121	289
122	314
123	322
124	336
125	317
126	264
127	297
128	224
129	251
130	244
131	208
132	223
133	221
134	168
135	173
136	192
137	188
138	231
139	184
140	179
141	174
142	199
143	169
144	166
145	162
146	156
147	178
148	149
149	162
150	159
151	144
152	133
153	156
154	148
155	126
156	142
157	127
158	128
159	86
160	103
161	97
162	108
163	98
164	100
165	99
166	111
167	125
168	119
169	95
170	85
171	92
172	97
173	92
174	76
175	93
176	114
177	97
178	81
179	87
180	65
181	64
182	67
183	69
184	54
185	60
186	45
187	44
188	49
189	51
190	53
191	39
192	62
193	53
194	48
195	42
196	49
197	54
198	32
199	54
200	42
201	37
202	19
203	34
204	36
205	27
206	22
207	35
208	25
209	39
210	41
211	36
212	30
213	26
214	27
215	43
216	33
217	38
218	44
219	36
220	31
221	29
222	30
223	34
224	37
225	23
226	19
227	29
228	25
229	33
230	30
231	33
232	40
233	31
234	44
235	43
236	39
237	37
238	35
239	47
240	34
241	35
242	27
243	23
244	21
245	22
246	17
247	18
248	14
249	28
250	1894