#SentieonCommandLine: /lustre8/home/ykawai-tnproj-pg/packages/sentieon-genomics-201911/libexec/driver -t 8 -r /lustre8/home/ncbn-pg/data/resource/Homo_sapiens_assembly38.fasta --interval /lustre8/home/ncbn-pg/data/resource/picard-interval-list/GRCh38.chrY.interval_list -i SGDP/LP6005443-DNA_F08.hs38DH/LP6005443-DNA_F08.hs38DH.cram --algo WgsMetricsAlgo --min_map_qual 0 SGDP/LP6005443-DNA_F08.hs38DH/QCmetrics/LP6005443-DNA_F08.hs38DH.WgsMetrics.chrY.txt GENOME_TERRITORY MEAN_COVERAGE SD_COVERAGE MEDIAN_COVERAGE MAD_COVERAGE PCT_EXC_MAPQ PCT_EXC_DUPE PCT_EXC_UNPAIRED PCT_EXC_BASEQ PCT_EXC_OVERLAP PCT_EXC_CAPPED PCT_EXC_TOTAL PCT_1X PCT_5X PCT_10X PCT_15X PCT_20X PCT_25X PCT_30X PCT_40X PCT_50X PCT_60X PCT_70X PCT_80X PCT_90X PCT_100X HET_SNP_SENSITIVITY HET_SNP_Q 23636355 23.032 26.434 19 4 0 0.04791 0.0013014 0.032857 0.0093795 0.28865 0.38009 0.99885 0.9904 0.92914 0.77068 0.47321 0.19561 0.079717 0.044892 0.038075 0.033658 0.029505 0.02518 0.02085 0.017408 0.99098 20 coverage high_quality_coverage_count 0 27230 1 24240 2 32492 3 54200 4 88862 5 139800 6 207263 7 283002 8 366816 9 450880 10 525800 11 616672 12 730322 13 864033 14 1008592 15 1161028 16 1315363 17 1447311 18 1536906 19 1570619 20 1543346 21 1465817 22 1345525 23 1188716 24 1017975 25 838814 26 672279 27 526141 28 402749 29 299331 30 221409 31 161509 32 117777 33 86513 34 64998 35 49204 36 38660 37 31938 38 27195 39 23935 40 21423 41 19700 42 18279 43 17111 44 16169 45 15199 46 14149 47 13370 48 13227 49 12523 50 12108 51 11270 52 10901 53 10536 54 10234 55 9946 56 9890 57 9949 58 9877 59 9691 60 9920 61 9677 62 9942 63 10133 64 9815 65 9690 66 9704 67 9638 68 9722 69 9905 70 9512 71 9864 72 9887 73 9743 74 10333 75 10479 76 10712 77 10571 78 10673 79 10451 80 10484 81 10421 82 10374 83 10421 84 10425 85 10211 86 10209 87 10092 88 9965 89 9759 90 9555 91 9290 92 9136 93 8637 94 8222 95 7912 96 7677 97 7243 98 6861 99 6803 100 6597 101 6223 102 5761 103 5687 104 5226 105 4847 106 4693 107 4366 108 4245 109 3972 110 3806 111 3614 112 3360 113 3374 114 3106 115 2994 116 2784 117 2684 118 2505 119 2408 120 2315 121 2262 122 2142 123 2171 124 2049 125 1943 126 1916 127 1878 128 1847 129 1736 130 1702 131 1590 132 1665 133 1518 134 1492 135 1467 136 1458 137 1474 138 1406 139 1352 140 1281 141 1322 142 1290 143 1283 144 1223 145 1205 146 1212 147 1142 148 1075 149 1155 150 1144 151 1134 152 1120 153 1090 154 1112 155 1142 156 1168 157 1125 158 1102 159 1096 160 1106 161 1110 162 1090 163 1047 164 1002 165 1004 166 1029 167 1009 168 1027 169 1010 170 988 171 986 172 987 173 980 174 983 175 952 176 963 177 955 178 993 179 1009 180 1014 181 966 182 1005 183 1069 184 1017 185 984 186 988 187 1013 188 1012 189 935 190 1033 191 945 192 948 193 920 194 911 195 973 196 877 197 921 198 920 199 892 200 910 201 872 202 862 203 834 204 807 205 798 206 833 207 770 208 779 209 814 210 768 211 796 212 776 213 722 214 742 215 695 216 719 217 775 218 691 219 770 220 777 221 742 222 805 223 762 224 708 225 676 226 649 227 686 228 676 229 607 230 633 231 599 232 620 233 626 234 614 235 600 236 633 237 641 238 639 239 668 240 616 241 624 242 644 243 648 244 572 245 611 246 575 247 604 248 593 249 551 250 195712