#SentieonCommandLine: /lustre8/home/ykawai-tnproj-pg/packages/sentieon-genomics-201911/libexec/driver -t 8 -r /lustre8/home/ncbn-pg/data/resource/Homo_sapiens_assembly38.fasta --interval /lustre8/home/ncbn-pg/data/resource/picard-interval-list/GRCh38.autosome-PAR.interval_list -i SGDP/LP6005443-DNA_G05.hs38DH/LP6005443-DNA_G05.hs38DH.cram --algo WgsMetricsAlgo --min_map_qual 0 SGDP/LP6005443-DNA_G05.hs38DH/QCmetrics/LP6005443-DNA_G05.hs38DH.WgsMetrics.autosome.txt GENOME_TERRITORY MEAN_COVERAGE SD_COVERAGE MEDIAN_COVERAGE MAD_COVERAGE PCT_EXC_MAPQ PCT_EXC_DUPE PCT_EXC_UNPAIRED PCT_EXC_BASEQ PCT_EXC_OVERLAP PCT_EXC_CAPPED PCT_EXC_TOTAL PCT_1X PCT_5X PCT_10X PCT_15X PCT_20X PCT_25X PCT_30X PCT_40X PCT_50X PCT_60X PCT_70X PCT_80X PCT_90X PCT_100X HET_SNP_SENSITIVITY HET_SNP_Q 2747965384 43.035 12.945 43 6 0 0.019851 0.0013755 0.057478 0.0045633 0.013604 0.096871 0.99874 0.99676 0.99435 0.99095 0.98444 0.96891 0.92694 0.64492 0.21846 0.03552 0.0094257 0.0063791 0.0049937 0.0040395 0.99767 26 coverage high_quality_coverage_count 0 3461255 1 1568555 2 1364987 3 1276685 4 1235532 5 1239966 6 1263956 7 1307851 8 1364808 9 1433544 10 1542628 11 1669559 12 1830900 13 2029591 14 2283011 15 2604966 16 2987700 17 3462111 18 4051536 19 4770974 20 5669254 21 6789386 22 8179038 23 9924608 24 12114411 25 14841619 26 18195564 27 22271937 28 27145112 29 32879245 30 39452065 31 46872830 32 55051638 33 63792985 34 72959618 35 82272026 36 91449966 37 100159481 38 108046834 39 114928029 40 120383555 41 124275489 42 126440124 43 126735706 44 125212566 45 121959364 46 117102317 47 110909079 48 103533293 49 95346596 50 86598593 51 77616108 52 68671558 53 59993895 54 51729149 55 44066214 56 37100422 57 30864674 58 25401360 59 20672379 60 16664462 61 13307592 62 10544320 63 8291553 64 6484200 65 5058836 66 3944043 67 3077312 68 2417459 69 1915806 70 1537656 71 1256125 72 1044829 73 887343 74 770988 75 683701 76 616667 77 563970 78 522156 79 488561 80 461134 81 437270 82 417231 83 398913 84 384662 85 367987 86 353753 87 341222 88 328675 89 316337 90 304760 91 294774 92 282714 93 275062 94 264716 95 256462 96 248150 97 239542 98 232296 99 223400 100 216601 101 209482 102 202720 103 196392 104 190363 105 184154 106 176828 107 172193 108 166512 109 161291 110 156218 111 151346 112 146411 113 142676 114 138048 115 134108 116 129705 117 126500 118 122389 119 119114 120 116096 121 113410 122 110374 123 107928 124 103882 125 101624 126 99478 127 96776 128 94534 129 91731 130 89930 131 87452 132 84969 133 83015 134 81713 135 79226 136 77833 137 75941 138 74768 139 73446 140 71306 141 69637 142 68332 143 67078 144 66191 145 64417 146 63385 147 62152 148 61018 149 59926 150 58097 151 57689 152 56094 153 55104 154 54073 155 52955 156 52357 157 50766 158 50612 159 49626 160 48583 161 47683 162 47191 163 46542 164 45947 165 45238 166 44299 167 43568 168 42804 169 41949 170 41596 171 40620 172 39564 173 39313 174 38710 175 37478 176 37162 177 36533 178 35928 179 35479 180 34763 181 34419 182 34267 183 33080 184 32810 185 32186 186 32085 187 31517 188 30932 189 30508 190 30117 191 29355 192 29301 193 28697 194 28601 195 28345 196 28138 197 27335 198 26989 199 26514 200 26176 201 25863 202 25475 203 24855 204 24674 205 24456 206 24077 207 23836 208 23578 209 22950 210 22674 211 22569 212 22079 213 21633 214 21645 215 20852 216 20830 217 20914 218 20468 219 19964 220 19549 221 19439 222 19254 223 19089 224 18964 225 18668 226 18490 227 18410 228 18411 229 18042 230 17899 231 17559 232 17186 233 17384 234 16788 235 16478 236 16278 237 16411 238 16074 239 15843 240 15775 241 15602 242 15459 243 15256 244 15064 245 14894 246 15111 247 14671 248 14649 249 14510 250 2409630