#SentieonCommandLine: /lustre8/home/ykawai-tnproj-pg/packages/sentieon-genomics-201911/libexec/driver -t 8 -r /lustre8/home/ncbn-pg/data/resource/Homo_sapiens_assembly38.fasta --interval /lustre8/home/ncbn-pg/data/resource/picard-interval-list/GRCh38.chrX.interval_list -i SGDP/LP6005443-DNA_G05.hs38DH/LP6005443-DNA_G05.hs38DH.cram --algo WgsMetricsAlgo --min_map_qual 0 SGDP/LP6005443-DNA_G05.hs38DH/QCmetrics/LP6005443-DNA_G05.hs38DH.WgsMetrics.chrX.txt GENOME_TERRITORY MEAN_COVERAGE SD_COVERAGE MEDIAN_COVERAGE MAD_COVERAGE PCT_EXC_MAPQ PCT_EXC_DUPE PCT_EXC_UNPAIRED PCT_EXC_BASEQ PCT_EXC_OVERLAP PCT_EXC_CAPPED PCT_EXC_TOTAL PCT_1X PCT_5X PCT_10X PCT_15X PCT_20X PCT_25X PCT_30X PCT_40X PCT_50X PCT_60X PCT_70X PCT_80X PCT_90X PCT_100X HET_SNP_SENSITIVITY HET_SNP_Q 152114341 21.404 6.2215 21 4 0 0.012906 0.0015254 0.05423 0.0044752 0.00012258 0.073259 0.9988 0.9944 0.97904 0.89619 0.6293 0.27877 0.074931 0.0042182 0.0013192 0.00066667 0.00043225 0.00031428 0.00024213 0.0001899 0.99543 23 coverage high_quality_coverage_count 0 182659 1 128337 2 148477 3 177196 4 214632 5 259204 6 320545 7 413106 8 559501 9 784577 10 1128032 11 1628396 12 2317179 13 3212891 14 4316552 15 5579897 16 6921900 17 8255291 18 9449810 19 10390124 20 10990840 21 11223203 22 11033718 23 10465399 24 9608366 25 8539600 26 7358626 27 6152172 28 5003525 29 3952569 30 3047854 31 2295099 32 1687394 33 1214652 34 860526 35 601809 36 417379 37 288622 38 200626 39 142404 40 101846 41 75510 42 58008 43 45763 44 37915 45 32208 46 27107 47 23655 48 20619 49 18348 50 16102 51 14360 52 12694 53 10956 54 9902 55 8789 56 7736 57 6960 58 6138 59 5626 60 5078 61 4612 62 4203 63 3897 64 3455 65 3287 66 3096 67 2966 68 2625 69 2440 70 2225 71 1998 72 1912 73 1880 74 1852 75 1766 76 1721 77 1553 78 1564 79 1473 80 1309 81 1187 82 1139 83 1085 84 1088 85 1114 86 1059 87 995 88 983 89 1017 90 947 91 917 92 859 93 770 94 817 95 742 96 763 97 705 98 697 99 727 100 655 101 610 102 635 103 599 104 611 105 636 106 527 107 552 108 533 109 523 110 514 111 482 112 440 113 446 114 406 115 432 116 425 117 371 118 371 119 386 120 399 121 355 122 376 123 344 124 368 125 336 126 282 127 301 128 278 129 262 130 267 131 257 132 280 133 269 134 231 135 259 136 252 137 232 138 221 139 220 140 236 141 203 142 207 143 179 144 193 145 208 146 200 147 201 148 213 149 196 150 204 151 209 152 188 153 180 154 183 155 194 156 196 157 188 158 179 159 142 160 155 161 145 162 147 163 137 164 137 165 132 166 127 167 139 168 137 169 134 170 131 171 107 172 125 173 106 174 118 175 100 176 113 177 104 178 109 179 99 180 93 181 82 182 84 183 80 184 96 185 90 186 94 187 71 188 71 189 87 190 79 191 60 192 66 193 62 194 64 195 84 196 63 197 63 198 60 199 60 200 67 201 69 202 71 203 60 204 69 205 58 206 65 207 62 208 62 209 73 210 64 211 73 212 84 213 70 214 70 215 68 216 70 217 63 218 49 219 61 220 57 221 63 222 46 223 59 224 61 225 57 226 60 227 48 228 57 229 56 230 58 231 48 232 46 233 49 234 39 235 43 236 38 237 51 238 38 239 33 240 40 241 27 242 42 243 32 244 43 245 31 246 31 247 21 248 30 249 25 250 2377