#SentieonCommandLine: /lustre8/home/ykawai-tnproj-pg/packages/sentieon-genomics-201911/libexec/driver -t 8 -r /lustre8/home/ncbn-pg/data/resource/Homo_sapiens_assembly38.fasta --interval /lustre8/home/ncbn-pg/data/resource/picard-interval-list/GRCh38.chrY.interval_list -i SGDP/LP6005443-DNA_G05.hs38DH/LP6005443-DNA_G05.hs38DH.cram --algo WgsMetricsAlgo --min_map_qual 0 SGDP/LP6005443-DNA_G05.hs38DH/QCmetrics/LP6005443-DNA_G05.hs38DH.WgsMetrics.chrY.txt GENOME_TERRITORY MEAN_COVERAGE SD_COVERAGE MEDIAN_COVERAGE MAD_COVERAGE PCT_EXC_MAPQ PCT_EXC_DUPE PCT_EXC_UNPAIRED PCT_EXC_BASEQ PCT_EXC_OVERLAP PCT_EXC_CAPPED PCT_EXC_TOTAL PCT_1X PCT_5X PCT_10X PCT_15X PCT_20X PCT_25X PCT_30X PCT_40X PCT_50X PCT_60X PCT_70X PCT_80X PCT_90X PCT_100X HET_SNP_SENSITIVITY HET_SNP_Q 23636355 25.772 26.604 21 4 0 0.060057 0.001253 0.046193 0.0071246 0.30962 0.42425 0.99929 0.99679 0.98392 0.89693 0.62828 0.29762 0.11687 0.049984 0.04071 0.035575 0.031769 0.02828 0.024642 0.020935 0.99687 25 coverage high_quality_coverage_count 0 16863 1 11561 2 13061 3 14933 4 19544 5 25191 6 34576 7 51241 8 76383 9 116807 10 178167 11 263261 12 378807 13 529631 14 706218 15 902417 16 1107486 17 1297319 18 1458835 19 1583780 20 1660324 21 1666114 22 1616111 23 1508479 24 1364559 25 1195129 26 1016104 27 843138 28 680897 29 537085 30 415422 31 315049 32 235304 33 175415 34 129817 35 96629 36 73356 37 56317 38 45834 39 37760 40 32197 41 28387 42 25482 43 23043 44 21273 45 20166 46 18669 47 17568 48 16590 49 15825 50 14673 51 14444 52 13330 53 12672 54 12054 55 11670 56 11095 57 10938 58 10342 59 10140 60 9663 61 9706 62 9249 63 9094 64 8988 65 8664 66 8625 67 8593 68 8670 69 8710 70 8441 71 8350 72 8191 73 8369 74 8247 75 8156 76 8161 77 8239 78 8062 79 8252 80 8279 81 8296 82 8216 83 8557 84 8561 85 8871 86 8727 87 8782 88 8771 89 8928 90 8913 91 9153 92 8998 93 8899 94 8839 95 8601 96 8701 97 8558 98 8590 99 8381 100 8463 101 8143 102 8115 103 7827 104 7714 105 7437 106 7259 107 7018 108 6758 109 6551 110 6439 111 6216 112 6276 113 5911 114 5633 115 5272 116 5279 117 5153 118 4720 119 4541 120 4323 121 4280 122 3966 123 3780 124 3559 125 3290 126 3151 127 3065 128 2776 129 2812 130 2544 131 2481 132 2338 133 2354 134 2217 135 2282 136 2157 137 2097 138 1999 139 1884 140 1915 141 1776 142 1790 143 1639 144 1629 145 1624 146 1616 147 1529 148 1627 149 1536 150 1462 151 1406 152 1446 153 1373 154 1282 155 1357 156 1305 157 1292 158 1263 159 1255 160 1213 161 1247 162 1197 163 1236 164 1119 165 1201 166 1164 167 1152 168 1187 169 1168 170 1116 171 1130 172 1146 173 1178 174 1091 175 1106 176 1075 177 1073 178 1073 179 1117 180 1099 181 1053 182 1049 183 1029 184 1023 185 1050 186 1009 187 998 188 1017 189 1053 190 1023 191 945 192 1003 193 953 194 973 195 944 196 933 197 922 198 874 199 869 200 898 201 853 202 819 203 852 204 794 205 838 206 827 207 807 208 888 209 826 210 835 211 815 212 786 213 789 214 786 215 747 216 708 217 740 218 731 219 690 220 714 221 716 222 706 223 688 224 675 225 701 226 656 227 667 228 628 229 693 230 639 231 623 232 596 233 616 234 662 235 646 236 601 237 618 238 690 239 678 240 601 241 579 242 588 243 578 244 569 245 576 246 552 247 574 248 636 249 547 250 198770