#SentieonCommandLine: /lustre8/home/ykawai-tnproj-pg/packages/sentieon-genomics-201911/libexec/driver -t 8 -r /lustre8/home/ncbn-pg/data/resource/Homo_sapiens_assembly38.fasta --interval /lustre8/home/ncbn-pg/data/resource/picard-interval-list/GRCh38.autosome-PAR.interval_list -i SGDP/LP6005443-DNA_H11.hs38DH/LP6005443-DNA_H11.hs38DH.cram --algo WgsMetricsAlgo --min_map_qual 0 SGDP/LP6005443-DNA_H11.hs38DH/QCmetrics/LP6005443-DNA_H11.hs38DH.WgsMetrics.autosome.txt GENOME_TERRITORY MEAN_COVERAGE SD_COVERAGE MEDIAN_COVERAGE MAD_COVERAGE PCT_EXC_MAPQ PCT_EXC_DUPE PCT_EXC_UNPAIRED PCT_EXC_BASEQ PCT_EXC_OVERLAP PCT_EXC_CAPPED PCT_EXC_TOTAL PCT_1X PCT_5X PCT_10X PCT_15X PCT_20X PCT_25X PCT_30X PCT_40X PCT_50X PCT_60X PCT_70X PCT_80X PCT_90X PCT_100X HET_SNP_SENSITIVITY HET_SNP_Q 2747965384 42.913 12.316 43 5 0 0.021481 0.00098143 0.050513 0.0082032 0.013165 0.094344 0.99883 0.99704 0.99493 0.99218 0.98717 0.97528 0.94045 0.65231 0.19319 0.026398 0.0086266 0.0062311 0.00491 0.0040087 0.99787 27 coverage high_quality_coverage_count 0 3202763 1 1414863 2 1225253 3 1163530 4 1135820 5 1127143 6 1127928 7 1144778 8 1175110 9 1216805 10 1280330 11 1364184 12 1477312 13 1620134 14 1803085 15 2032771 16 2319030 17 2672854 18 3109765 19 3653254 20 4322633 21 5161953 22 6229425 23 7598448 24 9354266 25 11634576 26 14548152 27 18225465 28 22837902 29 28471841 30 35214884 31 43127468 32 52120428 33 62112641 34 72870993 35 84067830 36 95282920 37 106125051 38 116097115 39 124772647 40 131714095 41 136531995 42 138998986 43 139017434 44 136620331 45 131988308 46 125286077 47 116976131 48 107431715 49 97064271 50 86292162 51 75517597 52 65110137 53 55301842 54 46311226 55 38221252 56 31110598 57 25018519 58 19861426 59 15607868 60 12140516 61 9369143 62 7189242 63 5498238 64 4196518 65 3219433 66 2483265 67 1941226 68 1541752 69 1255001 70 1043652 71 891049 72 776225 73 691231 74 627683 75 577354 76 537437 77 504475 78 478904 79 454892 80 433380 81 416746 82 397842 83 381698 84 366465 85 353321 86 339310 87 325556 88 314173 89 301901 90 291400 91 280296 92 269414 93 259630 94 249670 95 240919 96 232731 97 224693 98 217689 99 210155 100 202423 101 196284 102 190756 103 183884 104 179446 105 173266 106 169767 107 163946 108 159836 109 154722 110 152313 111 148527 112 145116 113 141650 114 138047 115 134376 116 132435 117 128146 118 125370 119 123221 120 119877 121 117175 122 114931 123 112612 124 110078 125 108311 126 105792 127 103406 128 101592 129 98981 130 97513 131 95408 132 93045 133 90590 134 88904 135 87453 136 85061 137 83108 138 81926 139 79927 140 78624 141 76868 142 74488 143 73583 144 71113 145 69375 146 68156 147 66418 148 65446 149 64065 150 62583 151 61300 152 60398 153 59344 154 58380 155 57155 156 55865 157 54580 158 53955 159 53066 160 52374 161 51019 162 50076 163 49328 164 48351 165 47160 166 46700 167 45455 168 44742 169 43754 170 43079 171 42414 172 41584 173 41036 174 40238 175 39540 176 39048 177 38093 178 37443 179 36758 180 35824 181 35568 182 34843 183 34391 184 34002 185 33293 186 32672 187 32133 188 31380 189 30833 190 30617 191 29949 192 29819 193 28694 194 28317 195 28015 196 27308 197 27006 198 26759 199 26342 200 26106 201 25682 202 25251 203 24949 204 24705 205 24386 206 24198 207 23786 208 23265 209 23061 210 22468 211 22665 212 22104 213 21999 214 21629 215 21345 216 21247 217 20952 218 20468 219 20254 220 20325 221 19503 222 19326 223 18931 224 18996 225 18871 226 18557 227 18565 228 18474 229 17888 230 18021 231 17700 232 17054 233 17226 234 16666 235 16694 236 16445 237 16181 238 15884 239 15732 240 15612 241 15279 242 14973 243 14991 244 14580 245 14469 246 14296 247 13855 248 13668 249 13707 250 2152910