#SentieonCommandLine: /lustre8/home/ykawai-tnproj-pg/packages/sentieon-genomics-201911/libexec/driver -t 8 -r /lustre8/home/ncbn-pg/data/resource/Homo_sapiens_assembly38.fasta --interval /lustre8/home/ncbn-pg/data/resource/picard-interval-list/GRCh38.chrY.interval_list -i SGDP/LP6005443-DNA_H11.hs38DH/LP6005443-DNA_H11.hs38DH.cram --algo WgsMetricsAlgo --min_map_qual 0 SGDP/LP6005443-DNA_H11.hs38DH/QCmetrics/LP6005443-DNA_H11.hs38DH.WgsMetrics.chrY.txt
GENOME_TERRITORY	MEAN_COVERAGE	SD_COVERAGE	MEDIAN_COVERAGE	MAD_COVERAGE	PCT_EXC_MAPQ	PCT_EXC_DUPE	PCT_EXC_UNPAIRED	PCT_EXC_BASEQ	PCT_EXC_OVERLAP	PCT_EXC_CAPPED	PCT_EXC_TOTAL	PCT_1X	PCT_5X	PCT_10X	PCT_15X	PCT_20X	PCT_25X	PCT_30X	PCT_40X	PCT_50X	PCT_60X	PCT_70X	PCT_80X	PCT_90X	PCT_100X	HET_SNP_SENSITIVITY	HET_SNP_Q	
23636355	2.6825	18.327	0	0	0	0.060726	0.0034696	0.045598	0.029519	0.41182	0.55113	0.14981	0.073854	0.043136	0.029323	0.022162	0.01817	0.015771	0.012906	0.011163	0.010054	0.0092194	0.0085016	0.00787	0.0073389	0.11034	1	

coverage	high_quality_coverage_count	
0	20095338
1	784732
2	438338
3	321038
4	251270
5	204223
6	164753
7	138386
8	117252
9	101438
10	87716
11	72714
12	62444
13	55814
14	47808
15	41939
16	37241
17	33631
18	29686
19	26759
20	23315
21	21087
22	18509
23	16667
24	14785
25	13222
26	11943
27	11203
28	10519
29	9826
30	8574
31	8185
32	7678
33	7082
34	6558
35	6431
36	6247
37	5855
38	5622
39	5469
40	5235
41	4877
42	4511
43	4340
44	4148
45	3977
46	3879
47	3595
48	3430
49	3211
50	3103
51	2963
52	2876
53	2890
54	2634
55	2460
56	2393
57	2354
58	2314
59	2227
60	2131
61	2107
62	2105
63	2104
64	2065
65	1931
66	1848
67	1882
68	1781
69	1773
70	1789
71	1767
72	1745
73	1707
74	1688
75	1671
76	1681
77	1685
78	1636
79	1599
80	1670
81	1597
82	1464
83	1489
84	1509
85	1469
86	1483
87	1463
88	1389
89	1396
90	1397
91	1332
92	1332
93	1330
94	1265
95	1180
96	1183
97	1200
98	1230
99	1103
100	1146
101	1200
102	1095
103	1092
104	1062
105	993
106	1044
107	1039
108	1043
109	1061
110	983
111	981
112	966
113	959
114	955
115	893
116	1060
117	955
118	972
119	999
120	946
121	906
122	923
123	931
124	927
125	915
126	987
127	935
128	930
129	926
130	901
131	906
132	889
133	862
134	887
135	905
136	909
137	952
138	916
139	963
140	915
141	1002
142	927
143	920
144	918
145	951
146	981
147	933
148	943
149	994
150	1032
151	959
152	879
153	931
154	896
155	812
156	860
157	818
158	830
159	764
160	693
161	698
162	707
163	669
164	688
165	691
166	673
167	645
168	603
169	578
170	606
171	526
172	586
173	604
174	595
175	583
176	587
177	613
178	541
179	600
180	590
181	562
182	585
183	579
184	537
185	554
186	506
187	546
188	552
189	530
190	551
191	500
192	524
193	485
194	524
195	527
196	493
197	515
198	505
199	533
200	556
201	498
202	488
203	496
204	476
205	484
206	507
207	513
208	452
209	485
210	474
211	499
212	487
213	494
214	463
215	457
216	476
217	459
218	384
219	449
220	451
221	424
222	388
223	410
224	394
225	416
226	389
227	375
228	384
229	394
230	381
231	399
232	391
233	379
234	356
235	369
236	375
237	371
238	370
239	355
240	302
241	350
242	372
243	344
244	326
245	334
246	326
247	365
248	368
249	348
250	72299