#SentieonCommandLine: /lustre8/home/ykawai-tnproj-pg/packages/sentieon-genomics-201911/libexec/driver -t 8 -r /lustre8/home/ncbn-pg/data/resource/Homo_sapiens_assembly38.fasta --interval /lustre8/home/ncbn-pg/data/resource/picard-interval-list/GRCh38.chrX.interval_list -i SGDP/LP6005519-DNA_F06.hs38DH/LP6005519-DNA_F06.hs38DH.cram --algo WgsMetricsAlgo --min_map_qual 0 SGDP/LP6005519-DNA_F06.hs38DH/QCmetrics/LP6005519-DNA_F06.hs38DH.WgsMetrics.chrX.txt GENOME_TERRITORY MEAN_COVERAGE SD_COVERAGE MEDIAN_COVERAGE MAD_COVERAGE PCT_EXC_MAPQ PCT_EXC_DUPE PCT_EXC_UNPAIRED PCT_EXC_BASEQ PCT_EXC_OVERLAP PCT_EXC_CAPPED PCT_EXC_TOTAL PCT_1X PCT_5X PCT_10X PCT_15X PCT_20X PCT_25X PCT_30X PCT_40X PCT_50X PCT_60X PCT_70X PCT_80X PCT_90X PCT_100X HET_SNP_SENSITIVITY HET_SNP_Q 152114341 46.559 10.964 47 6 0 0.014992 0.0011323 0.053962 0.0033286 0.00031145 0.073726 0.99944 0.99835 0.99664 0.99409 0.98986 0.98122 0.95967 0.78354 0.36818 0.076845 0.012495 0.0054667 0.0035229 0.0024069 0.99885 29 coverage high_quality_coverage_count 0 84624 1 40206 2 42127 3 42201 4 42037 5 44289 6 48459 7 51585 8 55839 9 60005 10 65341 11 70095 12 77255 13 83422 14 91616 15 100961 16 111827 17 126439 18 142007 19 162037 20 186411 21 215477 22 253714 23 299994 24 358115 25 430272 26 519018 27 629034 28 767649 29 933288 30 1133655 31 1374798 32 1652910 33 1978584 34 2343198 35 2746613 36 3180890 37 3645869 38 4123409 39 4610747 40 5081868 41 5535239 42 5935617 43 6281334 44 6551241 45 6746636 46 6848653 47 6855725 48 6764210 49 6582075 50 6324644 51 5989489 52 5601623 53 5168390 54 4701350 55 4226193 56 3748447 57 3282919 58 2844126 59 2429319 60 2049839 61 1714822 62 1419107 63 1159243 64 939316 65 755797 66 602635 67 476419 68 376597 69 294829 70 231953 71 183144 72 145910 73 117163 74 94954 75 78604 76 66000 77 56587 78 50082 79 44661 80 39949 81 36665 82 33811 83 31715 84 29313 85 27941 86 26014 87 24400 88 23798 89 22076 90 21218 91 20179 92 19276 93 17935 94 17362 95 16332 96 15274 97 14861 98 14006 99 13311 100 12634 101 11937 102 11635 103 11075 104 10461 105 10202 106 9757 107 9113 108 8822 109 8556 110 8160 111 7880 112 7340 113 7427 114 6963 115 6770 116 6591 117 6363 118 6091 119 5741 120 5635 121 5314 122 5065 123 4990 124 4764 125 4532 126 4620 127 4267 128 4202 129 4068 130 3975 131 3847 132 3704 133 3618 134 3531 135 3343 136 3139 137 3164 138 2961 139 2873 140 2735 141 2594 142 2506 143 2562 144 2483 145 2247 146 2336 147 2149 148 2057 149 2154 150 1923 151 1901 152 1817 153 1749 154 1666 155 1649 156 1554 157 1520 158 1383 159 1404 160 1366 161 1382 162 1324 163 1284 164 1157 165 1251 166 1115 167 1123 168 1008 169 958 170 1006 171 990 172 930 173 942 174 904 175 851 176 920 177 897 178 821 179 795 180 827 181 833 182 774 183 790 184 756 185 759 186 748 187 701 188 762 189 666 190 713 191 639 192 638 193 594 194 561 195 641 196 595 197 576 198 553 199 561 200 533 201 571 202 527 203 514 204 541 205 494 206 494 207 496 208 440 209 430 210 484 211 435 212 456 213 381 214 423 215 395 216 409 217 381 218 366 219 369 220 320 221 372 222 343 223 334 224 384 225 336 226 345 227 336 228 315 229 271 230 286 231 331 232 286 233 270 234 255 235 296 236 284 237 268 238 253 239 244 240 258 241 261 242 255 243 229 244 222 245 239 246 219 247 241 248 207 249 232 250 18267