#SentieonCommandLine: /lustre8/home/ykawai-tnproj-pg/packages/sentieon-genomics-201911/libexec/driver -t 8 -r /lustre8/home/ncbn-pg/data/resource/Homo_sapiens_assembly38.fasta --interval /lustre8/home/ncbn-pg/data/resource/picard-interval-list/GRCh38.autosome-PAR.interval_list -i SGDP/LP6005519-DNA_G02.hs38DH/LP6005519-DNA_G02.hs38DH.cram --algo WgsMetricsAlgo --min_map_qual 0 SGDP/LP6005519-DNA_G02.hs38DH/QCmetrics/LP6005519-DNA_G02.hs38DH.WgsMetrics.autosome.txt GENOME_TERRITORY MEAN_COVERAGE SD_COVERAGE MEDIAN_COVERAGE MAD_COVERAGE PCT_EXC_MAPQ PCT_EXC_DUPE PCT_EXC_UNPAIRED PCT_EXC_BASEQ PCT_EXC_OVERLAP PCT_EXC_CAPPED PCT_EXC_TOTAL PCT_1X PCT_5X PCT_10X PCT_15X PCT_20X PCT_25X PCT_30X PCT_40X PCT_50X PCT_60X PCT_70X PCT_80X PCT_90X PCT_100X HET_SNP_SENSITIVITY HET_SNP_Q 2747965384 53.423 18.017 52 10 0 0.024373 0.0012257 0.077861 0.0037897 0.012372 0.11962 0.99874 0.99703 0.99507 0.9925 0.98777 0.97681 0.95051 0.809 0.56873 0.32709 0.14671 0.049024 0.014898 0.0072103 0.99782 27 coverage high_quality_coverage_count 0 3453610 1 1396017 2 1165021 3 1089343 4 1055861 5 1045929 6 1046889 7 1064945 8 1089822 9 1134862 10 1196215 11 1275776 12 1383064 13 1524164 14 1696388 15 1909531 16 2181994 17 2518517 18 2937669 19 3454180 20 4092621 21 4870967 22 5821711 23 6971735 24 8352176 25 10002106 26 11921390 27 14145954 28 16683008 29 19515705 30 22636648 31 25989235 32 29555213 33 33241767 34 37045860 35 40850225 36 44609056 37 48254669 38 51727884 39 54960342 40 57923144 41 60603395 42 62954731 43 64967484 44 66606657 45 67983266 46 69005135 47 69735943 48 70159345 49 70306137 50 70221046 51 69873762 52 69308075 53 68537894 54 67597157 55 66491821 56 65212674 57 63823579 58 62299788 59 60667109 60 58919525 61 57044050 62 55084043 63 53042398 64 50916854 65 48707953 66 46463865 67 44175162 68 41831335 69 39477634 70 37092324 71 34719119 72 32354271 73 30010239 74 27727848 75 25476865 76 23306270 77 21220060 78 19216592 79 17316205 80 15510077 81 13837980 82 12274559 83 10836189 84 9512029 85 8311034 86 7221878 87 6257410 88 5391649 89 4623287 90 3953732 91 3369558 92 2861673 93 2427612 94 2058251 95 1742491 96 1477631 97 1253600 98 1067276 99 914900 100 789351 101 686370 102 601848 103 532644 104 475899 105 429124 106 393212 107 360414 108 333231 109 313573 110 295086 111 280572 112 267762 113 256442 114 246306 115 236752 116 228844 117 221276 118 215717 119 210630 120 203426 121 197700 122 191946 123 187314 124 182211 125 177650 126 173393 127 168519 128 164813 129 161486 130 156977 131 153319 132 150064 133 145835 134 142804 135 140107 136 137225 137 133350 138 129508 139 127706 140 124550 141 122156 142 119406 143 117561 144 114775 145 113180 146 110844 147 108452 148 105918 149 104804 150 101784 151 100158 152 98125 153 96500 154 93924 155 93006 156 90837 157 89361 158 87272 159 85673 160 83649 161 81991 162 80664 163 78442 164 77002 165 75266 166 73971 167 72624 168 71373 169 69795 170 67851 171 66619 172 65782 173 64072 174 63030 175 61668 176 60875 177 59889 178 58666 179 57508 180 56716 181 55382 182 54673 183 53826 184 52922 185 51753 186 51533 187 50651 188 49312 189 48957 190 48238 191 47456 192 46537 193 46012 194 45666 195 45040 196 44138 197 43671 198 43235 199 42411 200 41753 201 41461 202 40905 203 40178 204 39321 205 38892 206 38354 207 37693 208 37145 209 36635 210 36182 211 35507 212 34917 213 34731 214 33903 215 33629 216 33204 217 32781 218 32650 219 31717 220 31572 221 30881 222 30915 223 30483 224 29931 225 29211 226 29074 227 28827 228 28391 229 28309 230 27999 231 27402 232 27152 233 26718 234 26559 235 26496 236 25907 237 25882 238 25183 239 24539 240 24458 241 24286 242 23520 243 23319 244 23110 245 22882 246 22564 247 22136 248 21932 249 21623 250 3243368