#SentieonCommandLine: /lustre8/home/ykawai-tnproj-pg/packages/sentieon-genomics-201911/libexec/driver -t 8 -r /lustre8/home/ncbn-pg/data/resource/Homo_sapiens_assembly38.fasta --interval /lustre8/home/ncbn-pg/data/resource/picard-interval-list/GRCh38.chrY.interval_list -i SGDP/LP6005519-DNA_G02.hs38DH/LP6005519-DNA_G02.hs38DH.cram --algo WgsMetricsAlgo --min_map_qual 0 SGDP/LP6005519-DNA_G02.hs38DH/QCmetrics/LP6005519-DNA_G02.hs38DH.WgsMetrics.chrY.txt
GENOME_TERRITORY	MEAN_COVERAGE	SD_COVERAGE	MEDIAN_COVERAGE	MAD_COVERAGE	PCT_EXC_MAPQ	PCT_EXC_DUPE	PCT_EXC_UNPAIRED	PCT_EXC_BASEQ	PCT_EXC_OVERLAP	PCT_EXC_CAPPED	PCT_EXC_TOTAL	PCT_1X	PCT_5X	PCT_10X	PCT_15X	PCT_20X	PCT_25X	PCT_30X	PCT_40X	PCT_50X	PCT_60X	PCT_70X	PCT_80X	PCT_90X	PCT_100X	HET_SNP_SENSITIVITY	HET_SNP_Q	
23636355	3.2249	19.998	0	0	0	0.06657	0.0038861	0.07379	0.022164	0.39271	0.55912	0.15764	0.087301	0.055716	0.039234	0.029717	0.023901	0.020215	0.01588	0.013431	0.011753	0.010588	0.0097086	0.0090121	0.0084034	0.12012	1	

coverage	high_quality_coverage_count	
0	19910236
1	716188
2	405987
3	299690
4	240779
5	196276
6	169790
7	146209
8	124738
9	109536
10	96634
11	84946
12	77412
13	69424
14	61165
15	54509
16	49509
17	44205
18	40525
19	36200
20	32583
21	29748
22	26813
23	25153
24	23171
25	20825
26	18602
27	16989
28	15807
29	14905
30	13718
31	12577
32	11916
33	11236
34	10404
35	9449
36	8977
37	8547
38	8112
39	7522
40	7166
41	6589
42	6337
43	6017
44	5734
45	5603
46	5453
47	5063
48	4996
49	4927
50	4755
51	4601
52	4353
53	4275
54	4064
55	3912
56	3565
57	3480
58	3387
59	3264
60	3222
61	3117
62	2986
63	2967
64	2621
65	2657
66	2584
67	2517
68	2512
69	2364
70	2257
71	2284
72	2123
73	2149
74	2209
75	2051
76	2028
77	1889
78	1924
79	1865
80	1747
81	1759
82	1688
83	1737
84	1620
85	1663
86	1551
87	1608
88	1504
89	1586
90	1486
91	1544
92	1454
93	1388
94	1355
95	1434
96	1405
97	1501
98	1433
99	1387
100	1431
101	1284
102	1259
103	1227
104	1196
105	1247
106	1239
107	1199
108	1216
109	1201
110	1174
111	1127
112	1163
113	1188
114	1105
115	1078
116	1066
117	1013
118	1020
119	1035
120	1010
121	955
122	929
123	998
124	924
125	920
126	880
127	855
128	897
129	881
130	894
131	877
132	879
133	875
134	909
135	845
136	870
137	867
138	814
139	875
140	810
141	807
142	808
143	789
144	771
145	804
146	772
147	750
148	747
149	710
150	731
151	686
152	726
153	723
154	733
155	776
156	751
157	709
158	739
159	787
160	720
161	760
162	766
163	757
164	756
165	770
166	805
167	746
168	802
169	761
170	774
171	804
172	746
173	713
174	704
175	707
176	722
177	711
178	717
179	756
180	726
181	700
182	660
183	755
184	697
185	695
186	736
187	742
188	740
189	759
190	737
191	695
192	701
193	658
194	703
195	715
196	691
197	673
198	683
199	615
200	621
201	634
202	687
203	657
204	687
205	652
206	619
207	600
208	619
209	602
210	566
211	608
212	566
213	566
214	595
215	580
216	558
217	525
218	584
219	520
220	538
221	466
222	539
223	499
224	501
225	490
226	504
227	491
228	500
229	467
230	491
231	465
232	462
233	477
234	490
235	457
236	474
237	469
238	459
239	449
240	416
241	478
242	416
243	453
244	422
245	397
246	437
247	440
248	388
249	418
250	86998