#SentieonCommandLine: /lustre8/home/ykawai-tnproj-pg/packages/sentieon-genomics-201911/libexec/driver -t 8 -r /lustre8/home/ncbn-pg/data/resource/Homo_sapiens_assembly38.fasta --interval /lustre8/home/ncbn-pg/data/resource/picard-interval-list/GRCh38.chrY.interval_list -i SGDP/LP6005592-DNA_B01.hs38DH/LP6005592-DNA_B01.hs38DH.cram --algo WgsMetricsAlgo --min_map_qual 0 SGDP/LP6005592-DNA_B01.hs38DH/QCmetrics/LP6005592-DNA_B01.hs38DH.WgsMetrics.chrY.txt
GENOME_TERRITORY	MEAN_COVERAGE	SD_COVERAGE	MEDIAN_COVERAGE	MAD_COVERAGE	PCT_EXC_MAPQ	PCT_EXC_DUPE	PCT_EXC_UNPAIRED	PCT_EXC_BASEQ	PCT_EXC_OVERLAP	PCT_EXC_CAPPED	PCT_EXC_TOTAL	PCT_1X	PCT_5X	PCT_10X	PCT_15X	PCT_20X	PCT_25X	PCT_30X	PCT_40X	PCT_50X	PCT_60X	PCT_70X	PCT_80X	PCT_90X	PCT_100X	HET_SNP_SENSITIVITY	HET_SNP_Q	
23636355	2.8963	19.725	0	0	0	0.061267	0.0042542	0.045036	0.026302	0.42012	0.55698	0.14836	0.075129	0.044459	0.030508	0.023338	0.019335	0.016757	0.013707	0.011861	0.01069	0.0098138	0.0091437	0.0085533	0.0080215	0.11112	1	

coverage	high_quality_coverage_count	
0	20129564
1	746054
2	425177
3	314294
4	245482
5	200205
6	165343
7	138242
8	119078
9	102068
10	86414
11	74858
12	64324
13	55134
14	49028
15	43008
16	36932
17	33537
18	29273
19	26705
20	23060
21	20540
22	18726
23	16851
24	15447
25	14455
26	13219
27	11868
28	11110
29	10288
30	9395
31	8900
32	8098
33	7714
34	7182
35	6798
36	6387
37	6112
38	5910
39	5588
40	5349
41	5288
42	4872
43	4610
44	4289
45	4211
46	4228
47	3842
48	3551
49	3396
50	3287
51	3047
52	3064
53	2992
54	2807
55	2744
56	2555
57	2368
58	2444
59	2368
60	2369
61	2286
62	2201
63	2193
64	2107
65	2062
66	1944
67	1844
68	1894
69	1812
70	1734
71	1680
72	1620
73	1601
74	1563
75	1603
76	1512
77	1530
78	1474
79	1522
80	1436
81	1477
82	1404
83	1362
84	1385
85	1454
86	1372
87	1340
88	1401
89	1324
90	1375
91	1307
92	1289
93	1323
94	1210
95	1224
96	1222
97	1211
98	1214
99	1196
100	1151
101	1129
102	1061
103	1065
104	1058
105	999
106	1032
107	1009
108	982
109	957
110	985
111	899
112	912
113	926
114	910
115	909
116	862
117	797
118	859
119	850
120	841
121	783
122	809
123	851
124	816
125	799
126	837
127	793
128	707
129	750
130	723
131	753
132	721
133	718
134	669
135	698
136	721
137	713
138	732
139	687
140	708
141	713
142	675
143	693
144	635
145	717
146	598
147	610
148	702
149	585
150	657
151	647
152	659
153	669
154	679
155	676
156	674
157	692
158	679
159	682
160	692
161	695
162	654
163	673
164	644
165	749
166	671
167	751
168	793
169	740
170	721
171	716
172	715
173	772
174	758
175	710
176	729
177	678
178	718
179	720
180	686
181	718
182	753
183	714
184	672
185	671
186	681
187	691
188	714
189	655
190	731
191	662
192	596
193	637
194	639
195	652
196	598
197	580
198	550
199	587
200	592
201	587
202	566
203	587
204	536
205	522
206	519
207	541
208	511
209	498
210	508
211	436
212	458
213	457
214	451
215	453
216	427
217	446
218	454
219	416
220	443
221	411
222	446
223	406
224	407
225	420
226	402
227	414
228	380
229	394
230	401
231	444
232	375
233	399
234	361
235	335
236	349
237	375
238	387
239	360
240	344
241	383
242	367
243	347
244	362
245	383
246	361
247	364
248	382
249	355
250	92767